Nocardiopsis alba: B005_4685
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Entry
B005_4685 CDS
T02218
Name
(GenBank) exonuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nal
Nocardiopsis alba
Pathway
nal03030
DNA replication
nal03430
Mismatch repair
nal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B005_4685
03430 Mismatch repair
B005_4685
03440 Homologous recombination
B005_4685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nal03032
]
B005_4685
03400 DNA repair and recombination proteins [BR:
nal03400
]
B005_4685
Enzymes [BR:
nal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B005_4685
DNA replication proteins [BR:
nal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B005_4685
DNA repair and recombination proteins [BR:
nal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B005_4685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
DEDDh_C
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
AFR10933
UniProt:
J7LB99
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All DBs
Position
4903835..4904797
Genome browser
AA seq
320 aa
AA seq
DB search
MSHTWTAIDFETANQDRGSVCAVGLVRVSDGRVVDRFGTLIRPPGPAAFFSRHNTAVHGL
TADDVREAPTWEPVLERILDFSGGGPLVAHNAAFDMGALRQASAHIGHDLPALEYACTLA
MSRRTWGLPDHRLPTVCAHIGHDIAHHHRAEDDAEAAARIMIAAMERYGTTSLPEALRAA
GLPGHRTEPFLAGSAATVPVPPTSTAGEGRFERWQRAAQTPLPEPSPDADPNGPLFGRTV
CVSGDVAGMDKTEVWKRVAEAGGRPAKNVTKKTDVLVVGSSDHGGKTSKHRQAETYIAKG
QRIDIIDGRELLTRLGLTSA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcacacctggaccgcgatcgacttcgagaccgccaatcaggaccgtggcagcgtc
tgcgcggtggggttggtgcgggtgagcgacgggcgggtggtggaccggttcggcaccctc
atccggccgcccggccctgcggcgttcttctcccggcacaacaccgccgtccacgggctc
accgccgacgacgtacgcgaggcgcccacctgggaaccggtcctggaacggatcctggac
ttctccggcggcggccccctggtcgcgcacaacgcggccttcgacatgggcgcgctgcgt
caggccagcgcccacatcggccatgacctaccggccctggagtacgcctgcaccctggcg
atgtcccggcgcacctggggtctgcccgaccatcggctgcccacggtgtgcgcgcacatc
ggccatgacatcgcccaccatcaccgggccgaggacgacgccgaggcggccgcgcggatc
atgatcgccgcgatggagcgctacggcaccacctccctgcccgaggcgctgcgcgccgcc
ggtctccccgggcaccggaccgaaccgttcctggcgggttcggcggcgacggtgccggtc
ccgccgacgagcacggccggcgagggccggttcgaacggtggcagcgggccgcccagacc
ccgctgcccgagccctcccccgacgccgacccgaacggtcccctgttcgggcgcaccgtg
tgcgtgtcgggcgacgtggccggtatggacaagaccgaggtgtggaaacgcgtcgccgag
gcgggtggacgaccggccaagaacgtcaccaagaagaccgacgtgctcgtggtgggctcc
agcgaccacggcggcaagacctccaagcaccggcaggccgagacctacatcgccaagggc
cagcgcatcgacatcatcgatggacgtgagctgctgacccggctggggctgacctcggcc
tga
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