Nocardiopsis alba: B005_4846
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Entry
B005_4846 CDS
T02218
Name
(GenBank) AMP-binding enzyme family protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
nal
Nocardiopsis alba
Pathway
nal00061
Fatty acid biosynthesis
nal00071
Fatty acid degradation
nal01100
Metabolic pathways
nal01212
Fatty acid metabolism
nal02024
Quorum sensing
nal04146
Peroxisome
Module
nal_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
B005_4846
00071 Fatty acid degradation
B005_4846
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
B005_4846
09145 Cellular community - prokaryotes
02024 Quorum sensing
B005_4846
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
nal01004
]
B005_4846
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nal04147
]
B005_4846
Enzymes [BR:
nal01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
B005_4846
Lipid biosynthesis proteins [BR:
nal01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
B005_4846
Exosome [BR:
nal04147
]
Exosomal proteins
Exosomal proteins of breast milk
B005_4846
Exosomal proteins of breast cancer cells
B005_4846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AFR08303
UniProt:
J7L3R6
LinkDB
All DBs
Position
complement(5043954..5045969)
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AA seq
671 aa
AA seq
DB search
MGETPGSVAREQSGLSDQIYDVATSDAHAQVFSVFREERWERLTAGEFATEVTSLAKGLV
AAGVGEGDRVLSVLPQGHDWVRLAYAVWSVRAVLVPVPVVASSERLAYVVRHTRPAAAVV
SGERAHRVVVGLQREMSDLGRVWRFSEGLPEVASLGAYMDASAVRFRRDAVVAEDPAVVL
YPMSTVSRTMRGVVLSHGALLSAAADVVDRLWPRLSELPEGKASAVVDMPLSEFSGLAML
VACVAGRVRAGVARPGGLRRELLRFRPTVLVGTSGFFERVHGAERSTAHATDWNSVGAFN
AAVDAAVQFDQNKKKGAWARLSRSMHDWSFAKVREALGGRVHVAVCWGGGLSERLDSYFN
GLGVPLMQVYGVAEAGGVVAANAVGDRVAGSVGRVVEGREPWVSREGELFLRGGAVFLGY
WADVEGTRAAFRDGWLATGVAAEVDDEGFVRVSGRVRPQASALEVPGRFVASSGVSGVVE
VEGSEGSSGGPVEGRGAEEARRALAVLGAVAEGEGAGSGVVESGVEEPEEEGSSGVSGED
AELVAGFEARLRAHPLISQVLVIVEGRPFASALVTLVRDQLEYWRLVNGRPLSMAPEEVA
GDRDLLREVQGLVYEANRSVPRHLAVRSFHVLAEEFTVQSGLVRPSGELRREAVLRAFSE
EIDGLYRVRRE
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagacccccggttcggtggctcgggagcagtccgggctgagtgaccagatctat
gacgtggcgacctctgacgcgcatgcgcaggtgttctcggtgttccgggaggagcgttgg
gagcggttgacggcgggggagttcgcgaccgaggtgacgtcgttggccaagggtttggtc
gcggcgggtgtgggtgagggcgaccgggtcttgtcggtgttgccgcaggggcatgactgg
gtgcgtttggcgtacgcggtgtggtcggtgcgtgctgtgttggtgccggttccggtggtg
gcgtcgtcggagcggttggcgtatgtggtgcggcatacgcgtccggcggctgctgtggtg
tcgggtgagcgtgctcatcgtgtggtggtggggttgcagcgggagatgtcggatctgggg
agggtctggcgtttttcggagggtttgccggaggtggcgagcctgggggcgtatatggac
gcttcggctgtgcggttccgtcgtgatgcggtggtggcggaggatccggcggtggtgctg
tatccgatgagtacggtgtcgcggacgatgcggggtgtggtgctctcgcatggtgcgttg
ttgtcggcggcggcggatgtggtggatcggttgtggccgcggttgtcggagttgcccgag
ggtaaggcgagtgcggtggtggatatgccgctgtcggagttctcgggtctggcgatgttg
gtggcgtgtgtggccggtcgggtgcgggcgggtgtggctcggcctggtgggttgcgtcgt
gagttgttgaggttccggccgacggtgttggtggggacgtcggggttcttcgagcgtgtg
catggtgcggagcggtcgaccgcgcatgcgacggactggaattcggtgggggcgttcaac
gcggcggtggacgcggcggtgcagttcgatcagaacaagaagaagggtgcttgggcccgg
ttgtcgcggtcgatgcacgattggtctttcgcgaaggtgcgggaggcgttgggtggtcgt
gtgcatgtggcggtgtgctggggtggggggttgtcggagcgtctggattcgtatttcaac
ggtttgggtgttccgttgatgcaggtgtacggggtcgccgaggcgggtggtgtggtggcc
gcgaacgctgtgggtgatcgtgtggcgggttctgtgggtcgtgtggtggagggccgggag
ccgtgggtgtcgcgtgagggtgagttgttcttgcgtggtggtgcggtgttcttgggttat
tgggcggatgtggaggggacgcgggcggcgtttcgtgatgggtggttggccacgggtgtg
gcggccgaggtggatgatgagggttttgttcgggtgtcggggcgtgtgaggcctcaggcg
tcggcgttggaggttcctgggcgttttgtggcgtcttcgggggtttctggggttgttgag
gtggagggttctgaggggtcttcggggggcccggtcgaggggcggggggccgaggaggct
cgtcgtgcgttggcggttctgggggcggtggccgagggtgagggtgccgggtccggggtc
gtggagtcgggtgtggaggagccggaggaggagggttcttccggtgtttcgggtgaggac
gccgagttggtggcggggttcgaggctcggttgcgggctcatccgttgatcagtcaggtg
ttggtgatcgtggaggggcggccgttcgcgagtgctctggtgacgttggtgcgtgatcag
ttggagtattggcgtttggtgaatggtcggccgttgtcgatggcgccggaggaggtcgcg
ggggatcgtgatctgcttcgtgaggtgcaggggttggtgtacgaggccaatcggagtgtg
ccgcggcatttggcggtgcggtcgttccatgtgttggcggaggagttcacggtgcagtcg
gggttggtgcggccttcgggtgagttgcggcgtgaggctgtgttgagggcgttctccgag
gagatcgatggtctgtatcgggtgcgtcgggagtag
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