Nocardiopsis alba: B005_4990
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Entry
B005_4990 CDS
T02218
Name
(GenBank) TPR repeat family protein
Organism
nal
Nocardiopsis alba
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_10
TPR_2
NB-ARC
AAA_22
TPR_MalT
TPR_7
Rapsyn_N
WHD_MalT
ATPase_2
AAA_16
NACHT
nSTAND3
SNAP
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AFR09984
LinkDB
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Position
5180386..5182761
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AA seq
791 aa
AA seq
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MGAVAGRAVQARDVQGGIHFHGQNPPTHSSPVPGQLPGDVHGFVNRIGELEVLSTHLSTE
DLDGTSEAPVHVITGTAGVGKTALALHWAHRVRDRFPDGQLYVDLRGYGAGRPIDPDQAL
ERFVRAFGVPADSVPADLDDRSALYRSLLAERRVLVVLDNAATAAQVRPLLPGSSACVVL
VTSRDRLSGLVARDGARRLTVRTLEPEEAVELLEHVTESHRPRDEPYEVAELARLCGELP
LALRIAAERAAGRPHMPLSELIQDLRDESALWDALATDDEEEADAVRSVFAWSYRALPEE
TARLFRLLGLHPGHDFDAGSAAVLGDLPLRRARRVLDTLVGAHLVEQIGPDRYRFHDLLR
SYALDQARREESPESRYQALERLLNRYLYTADSASRVVDSPLRRLESVSASNEDANGDIR
EFADNADAVRWFEAENRNLVALTEAASEAGMDSIAWRLPIVLRHVYVYRTPMNAWISTTL
LGLGAARREREHAAEAELLESLGMAYVQSHRTQESIERHRHALRLRRELGDELGEAMSLN
ALGLAHLREHRVDRAREAFERSLATARRLGERTWEGIVLGNLADALLDSGDLHGSVALAE
KARAILRETGNRMSEFACLVCLGTAWRDLGSLDRALSYVLSALDVARELDNAVREGFALL
ELGRIHELLDRPEEALANFHVAALLHRSIGDHVREARSFEGAGQVHRSAGRLKESARFFR
QAAIGYRRNKAYHDLAECLDRLATVLSDIGEPEASREHRREALEAIADLSDPRAERLRET
VTARLTDPSPS
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggtcgcgggacgcgcggtacaggcgagggacgtccagggcgggatccacttc
cacggccagaacccgccgacgcattcctcccccgtacccggacagctgcccggtgacgtt
cacgggttcgtcaatcggatcggggagctggaggtgctcagcacccatctgagtaccgag
gacctcgatggcacttccgaggcacccgtccacgtcatcaccgggactgccggcgtcggc
aagaccgctctggccctgcactgggcccatcgagtgcgcgaccgtttccccgatggtcag
ctctacgtcgatctgcgagggtacggggccggtcgacccatcgacccggatcaggcactg
gagcgcttcgttcgcgccttcggggtgcccgccgactccgtgcccgcggatctcgacgac
cgctccgccctctaccgatccctcttggccgaacgacgcgtgctcgtcgtcctcgacaac
gcggcgaccgcggcacaggtacgccctttactacccggctcctcggcctgcgtcgtgctg
gtcaccagcagggaccggctgtccggcttggtcgccagagatggcgctcggcgtctgacc
gtgcgcacgctggagccggaggaggctgtggaactcctcgaacacgtcaccgagagccat
cggccacgcgacgagccgtatgaggtcgccgagctggcccgtctgtgcggagagctgccc
ttggccctgcgcatcgccgccgaacgagcggcgggtcgaccccacatgccgttgtcggag
ctgatccaggacctgcgagacgagtccgctctctgggacgctctcgccaccgacgatgag
gaggaggccgacgctgtccgtagtgtcttcgcctggtcctaccgggcgctgccggaggag
accgcacgcctgttccggctactcgggctgcaccccggccatgacttcgacgcgggctcc
gccgcggttctcggagacttgccgctcaggcgggcacgacgtgtcctggacacactcgtc
ggcgcccacctggtggaacagatcggcccggaccgatatcgattccacgatctcctacgt
tcctacgctctggaccaggctcgtcgtgaagagtcgcccgagagccgctaccaagcgctg
gaacgtctgctgaaccggtatctgtacaccgccgatagcgcttccagagtggtggattca
cccctacgtcggctcgaatcggtctcggcatcgaacgaggacgctaacggtgacattcgc
gagttcgccgacaacgcggacgcggtccgatggttcgaggccgagaacaggaacctggtc
gctttgaccgaggccgcctccgaagcgggcatggactcgatcgcatggcgtctaccgatc
gtgctgagacacgtctacgtctacagaacacccatgaacgcctggatctccacgactctc
ctcggactgggcgcggcccgacgcgagcgagaacacgccgccgaggcggagcttctggag
agtctggggatggcctacgtgcaatcccatcgcacgcaagagagcatcgagcggcatcgc
cacgctctgcggctacgacgagagctgggcgacgaactcggtgaagccatgtccctcaac
gcgttggggctggcacatctgcgtgagcatcgggtcgatcgggcacgtgaggccttcgaa
cgttcactcgcgaccgcccgacgtctgggcgaacggacctgggaggggatcgtcctcggc
aacctggccgacgctctactcgattcgggagatctccacggttcggtggccctggccgag
aaggccagagcgattctcagggagaccggtaacaggatgagcgagttcgcctgtctggtc
tgcctgggtacggcatggcgggatctgggttccctcgaccgggctctgtcctacgtcctg
agcgctctcgacgtcgcccgagaactcgacaacgcggtccgagaagggttcgcgctcttg
gaactcggcaggatccacgagttactcgaccggccggaggaggctctggcgaacttccat
gtggcggccctcctccaccggtcgatcggcgatcacgtgcgcgaggcccgttccttcgag
ggggcggggcaggtccaccggtcggccggacgtctgaaagagtccgcgcggttcttccgg
caggcggcgatcggctatcgcaggaacaaggcctaccacgatctcgcggagtgcctcgac
cgcctggccaccgtgctgtccgacatcggtgaaccggaggcctcgcgtgaacatcggcgc
gaagcgttggaagccatcgcggacctgtccgaccccagggccgaacgtctgcgcgagaca
gtgaccgcccgtctcacggacccctccccctcttga
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