Nocardiopsis alba: B005_5114
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Entry
B005_5114 CDS
T02218
Name
(GenBank) bacterial extracellular solute-binding family protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
nal
Nocardiopsis alba
Pathway
nal02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B005_5114
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nal02000
]
B005_5114
Transporters [BR:
nal02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
B005_5114
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
SBP_bac_11
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
AFR09636
UniProt:
J7LAE4
LinkDB
All DBs
Position
complement(5305049..5306095)
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AA seq
348 aa
AA seq
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MSHRHTVIPATATAAALALALTSCGNVAAPEGTATGDGEIVITYNSPTEWGNYGRVLSTF
TERTGIQAPNDPKNSGQALAALQAEKGAPVADVAYTGIAFAEQLTDAEVLQDYIPEGADQ
VPDDLRDPDGAWTTVHTGTIAFIVNEDHLDGAPVPTGWEDLLEPEYEGLVGYLDPTQAAV
GYSVATAANLALGGTLEDWGPGLDYLDGLKENGASTSAQTATAKVAQGEIPILIDTDFNG
YKLRDEGADVSVVIPEEGSLQIPYIVGLVAGAPNEDNGRELLDFYFSEEGQGLFAAGYMR
PVIGDLPEDVAERVLPDEDYERAVTIDYIEQGARQQEFIELYQDEVGF
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaccgacacacggtgatccccgcgaccgccaccgcggccgccctcgccctggcc
ctgacctcctgcggcaacgtggcggcgcccgagggcaccgccacgggcgacggggagatc
gtcatcacctacaactcgcccaccgaatggggcaactacgggcgggtcctgtccaccttc
accgagaggaccgggatccaggcccccaacgaccccaagaactccgggcaggccctggcc
gccctccaggccgagaagggcgcgcccgtcgccgacgtggcctacaccggtatcgccttc
gccgagcagctgacggatgccgaggtcctccaggactacatccccgagggcgcggaccag
gtccccgacgacctgcgcgaccccgacggggcctggaccaccgtccacaccgggaccatc
gccttcatcgtcaacgaggaccacctcgacggcgccccggtccccaccggctgggaggac
ctgctcgagcccgagtacgagggtctggtcggctacctcgaccccacccaggccgccgtc
ggctactccgtcgccaccgccgccaacctggccctgggcggaacgctcgaggactggggc
ccgggcctggactacctcgacggtctcaaggagaacggggcctcgacctcggcccagacg
gcgaccgcgaaggtcgcccagggcgagatccccatcctcatcgacaccgacttcaacggc
tacaagctccgggacgagggcgccgacgtctcggtcgtcatccccgaggagggttccctc
cagatcccctacatcgtgggtctggtcgccggcgcccccaacgaggacaacggcagggag
ctcctcgacttctacttctccgaggaggggcagggcctgttcgccgccgggtacatgcgc
cccgtcatcggcgacctgcccgaggacgtcgccgagcgcgtcctgccggacgaggactac
gagcgggccgtcaccatcgactacatcgagcagggcgcccgccagcaggagttcatcgag
ctgtaccaggacgaggtgggcttctag
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