Nocardiopsis alba: B005_5377
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Entry
B005_5377 CDS
T02218
Name
(GenBank) 3'-5' exonuclease family protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
nal
Nocardiopsis alba
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nal03016
]
B005_5377
Enzymes [BR:
nal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
B005_5377
Transfer RNA biogenesis [BR:
nal03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B005_5377
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
DUF2866
Major_capside
Motif
Other DBs
NCBI-ProteinID:
AFR10296
UniProt:
J7LC74
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All DBs
Position
5577283..5578617
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AA seq
444 aa
AA seq
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MLAFMSVEDGPPTASGGHSAYRSGVANALNSKTDSREPDHDDSERAPLLREPREGLPEVT
SDPGTLAGVIAALGAGTGPVAVDAERASGYRYGQRAYLVQLRREGSGSALIDPIACPDLS
GVDAAIGEAEVVLHAAHQDLPCLAEVNLRPGRLFDTELAGRLLGYQRVGLGFMVERLLDI
RLAKEHSAVDWSQRPLPEDWLRYAALDVEILIELRDRLEAELEEAGKLEWAREEFAAILA
APPKEPRTDPWRRTSGIHKVRKQRSLAAVRELWYERDRIARERDTSPGRVLPDAAIVEAA
TTMPRDANELNRIRQFGIKLARRYPATWLKAIDRARDMAQSELPRPNAPGDGPPPVNRWA
DRAPEAARRLDAAKSTVARIAEEITMPTENLLLPDTVRRLAWTPPETVDPDSVGAFLRSR
GARNWQVGLTAEPLTKALRVPEEG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgctttcatgagcgtcgaggacgggccgcccaccgcgtcgggtggccacagcgca
taccgtagtggtgtggcgaacgcgttgaactccaagacagactcccgcgaacccgaccat
gacgactcggagagggcacctctactgcgggaaccacgcgagggtcttcccgaggtcacc
tccgaccccggcactctggcgggtgtgatcgcggccctgggcgcgggcaccggccccgtc
gccgtggacgccgagcgcgcgtcggggtaccggtacggccagcgcgcctatctggtgcaa
ctgcgtcgggagggttccggttcggccctgatcgatccgatcgcctgtcccgatctgagc
ggggtcgacgcggccatcggcgaggccgaggtggtgctgcacgccgcgcaccaggacctg
ccctgtctggccgaggtcaacctgcgtcccggtcggctcttcgataccgagctggccgga
cgcctgctgggctatcagcgggtcgggctgggcttcatggtggagcggttgttggacatc
cgtctggccaaggagcactcggccgtggactggtcccagcggccgttgccggaggactgg
ctgcgctacgcggcgttggacgtggagatcctcatcgaactccgggaccgtctggaggcg
gagctggaggaggcgggcaaactggagtgggcccgtgaggagttcgccgcgatcctggcg
gccccgcccaaagagccgcgcaccgatccgtggcgacgcacctcggggatccacaaggtg
cgtaagcagcgttccctggccgccgtgcgcgagctctggtacgaacgcgatcgcatcgcg
cgggagcgggacacctctcccggcagggtcctgcccgacgcggcgatcgtggaggcggcg
acgaccatgccgcgcgacgccaatgagctgaaccggatccgccagttcggcatcaagctg
gcgcgacgctatccggccacgtggctgaaggcgatcgatcgggcccgggacatggcccag
tcggagctgccgcgccccaacgctccgggcgacggtcctccgccggtgaaccgttgggcc
gaccgcgcgccggaggccgcacggcggctggacgcggccaagtcgacggtggcgcggatc
gcggaggagatcacgatgccgaccgagaaccttctgctccccgacaccgtcagaaggttg
gcctggacgcctcccgagaccgtcgatccggactcggtgggcgccttcctgcggtcccga
ggggcccggaactggcaggtcgggttgacggcggaaccgctgacgaaggccttgcgggtg
cccgaagaggggtga
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