Nocardiopsis alba: B005_5453
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Entry
B005_5453 CDS
T02218
Name
(GenBank) apurinic endonuclease family protein
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
nal
Nocardiopsis alba
Pathway
nal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B005_5453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nal03400
]
B005_5453
Enzymes [BR:
nal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
B005_5453
DNA repair and recombination proteins [BR:
nal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
B005_5453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AFR10900
UniProt:
J7LHC5
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All DBs
Position
5678384..5679247
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AA seq
287 aa
AA seq
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MNNTEERPSSPVGAHVPVAGGMATKGLAYAEKIGAETVQVFVSNPRGWATNGGDPAQDAM
MRERADLPKFVHAPYLINPGTPSEETAGKSITSMEHALRRGAEIGALGVVMHTGSAVSGT
REDGLARVHERLIPMLERLGEDVPPLLLEPMAGQGQVLCATIDDLVPYFEALEWHPNVGV
CLDTAHMFAAGHDISTVEGMREALDRFGEVVGSDRLKLIHGNDSKAPCGSNKDRHENIGK
GHIGAEPFAELFRHPVTAGVPITLETPGPEGPHAEDVATLKRLRSEA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaccgaagagcgaccctcgtccccggtcggagcgcatgttccggtcgcgggc
ggtatggccaccaagggtctggcctacgcggagaagatcggcgccgagaccgtccaggtc
ttcgtgtccaaccccaggggttgggcgaccaacggcggcgacccggcgcaggacgccatg
atgcgcgaacgcgccgacctgcccaaattcgtgcacgcgccctacctgatcaaccccggc
accccgagcgaggagaccgccggcaagtcgatcacctcgatggagcacgcgctgcgacgc
ggcgccgagatcggtgccctgggtgtggtcatgcacaccggttcggcggtgtcggggacc
cgcgaggacgggctggcccgggtccacgagcggctgatccccatgctggaacggctgggc
gaggacgtaccgccgctgctgctggagccgatggccgggcagggccaggtcctgtgcgcc
accatcgacgacctggtgccctacttcgaggcgctggagtggcaccccaacgtgggcgtg
tgtctggacaccgcgcacatgttcgcggccgggcacgacatctccaccgtggagggcatg
cgcgaggcgctggaccgtttcggcgaggtggtgggctccgaccggctcaagctcatccac
ggtaacgactccaaggctccgtgcggcagcaacaaggaccggcacgagaacatcggcaag
ggccacatcggcgccgaaccgttcgccgagctgttccgacacccggtgaccgccggggtc
cccatcaccctggagaccccggggccggagggtccgcacgccgaggacgtggccaccctc
aagcgtctgcgctccgaggcctga
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