Candidatus Nitrospira allomarina: PP769_02195
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Entry
PP769_02195 CDS
T09427
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
nall
Candidatus Nitrospira allomarina
Pathway
nall02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nall00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PP769_02195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nall03000
]
PP769_02195
Transcription factors [BR:
nall03000
]
Prokaryotic type
Helix-turn-helix
Other families
PP769_02195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
GAF_2
AAA
AAA_5
Mg_chelatase
AAA_16
HTH_50
GAF_3
AAA_2
HTH_30
Motif
Other DBs
NCBI-ProteinID:
WNM58599
UniProt:
A0AA96GAR7
LinkDB
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Position
complement(514688..516253)
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AA seq
521 aa
AA seq
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MASRSGKEEISHKSIDLPETFLLQINQEQELQTLLQLIEKESRRLLQAEGISVFLLDRKE
CELWFPLPVSGRLLRLDARLGIAGACVASGELINVKDVQSDSRFFSGIDAQIKRQTQTLM
ALPVRDRTGDIIGVFEAVNKKGKDFTAQDEMVAQALVDRIAIPLQKFHVMEQLRRERERL
QQENAHLWKEVEGQYSTKKLMGNSLPMQRLIRIIDQVRDSSVDVLITGENGTGKELVAKA
IHYNSPRARQPFVAINCAALPETLIESELFGISKGTATDVEARIGKFEQANKGTLFLDEI
GDLGVSAQAKVLRVLQERAVEPVGKRESVPLDIRIIAATNKNLDAAIKAGMFRDDLYYRL
KVVHVHTPALREIPADIPLLVNYFLDLYSSQMDRPRKKLSAKAMQRFMEYSWPGNIRQLE
NEIKRLMVMVRGTTINEDALEEGIRCPVQTTGGTIDSKGRSLHQAVDELEQRMIKETLLA
CRFNQVQTAKRLGLSRQGLIKKIKRHNIQVNNLRDEVYESP
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtcgatccggaaaagaggaaatctctcacaagagtatagacctccctgaaaca
tttctgcttcagatcaaccaggagcaggaattacaaaccttgttacaactcattgaaaaa
gaatcccgccggttattgcaggcggagggaatcagtgtgtttcttctggatcggaaggaa
tgtgagctgtggtttcctctcccggtaagtggacggctactgcgcctggatgctcgcttg
ggaattgcgggcgcctgtgtagcgtccggagagttgattaatgtcaaagatgtgcaatcg
gactcaagatttttttcaggcatcgacgcacaaatcaagcggcaaacgcagaccctgatg
gcgttgccggttcgggacagaaccggcgacatcattggagtctttgaagccgtgaataaa
aagggcaaggattttaccgcccaggatgaaatggtggctcaggcgttggttgatcgcatc
gccatccctcttcagaaattccatgtcatggaacaattgcggcgggaacgcgaacggttg
caacaggaaaacgcgcatttgtggaaagaggtcgaaggacagtactccacgaaaaagctg
atgggaaacagcctgcccatgcagcgactgatcagaatcatcgatcaggtccgggatagt
tcagtggatgtgcttattaccggagaaaacggaaccggaaaggaattggtggctaaagcc
attcattacaatagccctcgagcccgtcaaccgtttgtcgcgatcaattgtgccgccctc
cccgaaacgttgatcgaaagtgaattattcggcatcagcaaaggcacggcgaccgacgtg
gaggccagaataggcaaatttgaacaggccaacaagggcacgctgtttttggatgaaatc
ggagatctgggcgtaagcgcccaggccaaagtattacgggtgctgcaggagcgggccgtc
gagccggtgggaaagcgagagtccgttcccctcgatatccggatcattgcggccactaat
aaaaatttagatgccgctattaaagccggcatgtttcgagacgatctctattaccgtctc
aaagtcgttcatgtgcatacgccggccttacgggagatcccggcagatatccccctgctc
gtcaattattttctggacctctacagctcgcagatggatcgacccaggaaaaaactgtcc
gccaaggccatgcagcgattcatggaatattcctggccgggaaatatccggcaattagag
aatgaaatcaaacggctaatggtcatggtccgtggaaccacgataaacgaggatgcgctc
gaagaaggcatccgatgccctgttcaaacgaccggaggcaccatagattcgaaaggccgg
agtcttcatcaagccgtcgatgaattggagcagcgtatgatcaaggagaccttgttggcc
tgccggttcaatcaggtccaaacggccaaacggttgggcttaagccggcagggactcatc
aaaaaaatcaaacgtcataacattcaggtcaacaacttgcgtgatgaagtctacgaatcc
ccctga
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