Candidatus Nitrospira allomarina: PP769_03790
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Entry
PP769_03790 CDS
T09427
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
nall
Candidatus Nitrospira allomarina
Pathway
nall02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nall00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PP769_03790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nall03021
]
PP769_03790
Transcription machinery [BR:
nall03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PP769_03790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
GvpK
Motif
Other DBs
NCBI-ProteinID:
WNM58898
UniProt:
A0AA96GBU0
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All DBs
Position
complement(876479..878101)
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AA seq
540 aa
AA seq
DB search
MSPSVSEQKPSWNGSIKRVKKQDRRPVLSGGSSPEVDRSSGMSDKQLPLYLKEIGQVSLL
DREGEVRLCKKIEEARRSMLEILYSLPMTLDYLQEQRIRLLNGEILAKHIVQKEKEGDVE
TESEEEPDIPDIQTEQQEDEEFRQRVIQQLSQLCQCVQFMMDKENASGCKQGASVSMQAR
KKIWQSLEGVNWHPGFTKQVESRIRATERQLTEVLKRLGISSQDILNGDERTRKAGRNYL
PATTPGVEVISGSHRSTLEAGEHLVYLEQEVLRLCFSEFLARVQRLDQAKIRLHFAKEAM
LEANLRLVVSVAKRYVNRGLDLLDLIQEGNIGLMRAVDRFEYQRGYKFSTYATWWIRQAV
TRALADQSRTVRIPVHVCDVLTRVRRTLDRLAVQLGREPKLEELSGAVDIPLDKLSTMLE
ATKGTLSLETPMGDEDGSPLSDLLQDPTAVSPCYSAERVDLQEKVTSLLRTLTPREAHII
RRRFGIGELEDATLEEIGLEFSVTRERIRQIEERALAKLREPQRNVVLRNFFQPSGPVVD
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagcccatctgtatcggagcagaaaccttcctggaatggttccattaaacgcgtgaaa
aagcaggaccgtcgtcctgtcttgtccggcggcagctctcctgaagtggaccgttcgtca
ggaatgagtgacaagcaacttcccctatacctaaaggaaatagggcaagtgtcattactt
gaccgggagggcgaagttcgtttgtgcaagaaaattgaggaagcccggcgaagtatgttg
gagattctatactcactccctatgaccttggactatcttcaagaacaacgtatacgcttg
ttgaatggcgaaattctggccaaacatattgttcaaaaggaaaaagaaggtgatgtggag
actgaatcggaggaagaacctgacattccggatattcaaaccgaacagcaagaggatgaa
gaatttcgccaacgagtaattcagcagctgagccaactttgtcaatgtgttcaattcatg
atggacaaggaaaatgcatccggatgtaagcaaggcgcttcggtctccatgcaagcccga
aaaaaaatatggcaaagtcttgaaggagtgaattggcatcctggatttaccaaacaggtg
gaaagccgcatacgggcaacggaacgccaacttactgaagtattgaaacgattaggaata
tcctctcaagatattttaaatggagatgagcgaacacgtaaggcgggtcgcaattattta
cccgccacaacccctggagtggaggtaatctcaggttcccatcgctccaccctggaggct
ggagaacacctcgtatatttggagcaagaagttttgcgcctgtgcttttcagaattcctc
gcacgggttcagcgcttagatcaagctaaaattcgcctgcacttcgccaaggaagcgatg
ttggaggcaaacttacgcctggtggttagtgttgccaagcgttatgtgaatcgaggcctc
gatttactggacctcatacaggaaggcaatatcggcctgatgcgtgcagtggaccgtttt
gagtatcaacgaggctataaatttagcacctatgcgacgtggtggattcggcaggcggta
acgagggcattggccgatcaatcaagaactgtgcggatcccggtgcacgtgtgtgatgtg
ctgactcgggtgcgacgaacgctggaccgtttagcggtgcaattggggcgtgaaccgaag
ttggaggagctcagcggcgcggtggatatcccattggataaattgtccacgatgttggaa
gcgacaaaagggactctgtcactcgaaactcccatgggcgatgaagatggttcgccgctc
tctgatctcttgcaagatcctacagccgtttctccatgctattcagcggaacgggtggat
ctccaggaaaaagtgacttccttgttaaggactttaacgcctcgggaggcacatattatt
cggcgacgctttggcattggagagcttgaagatgctactcttgaagagatcggtcttgaa
ttctctgtgacccgagaacgcattcgacaaattgaggaacgagccttggccaaattgcgt
gaaccccaacggaatgtggtcttgcgtaatttttttcaaccatctggtccagtcgtagat
tag
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integrated database retrieval system
