Candidatus Nitrospira allomarina: PP769_04875
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Entry
PP769_04875 CDS
T09427
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
nall
Candidatus Nitrospira allomarina
Pathway
nall03030
DNA replication
nall03430
Mismatch repair
nall03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nall00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PP769_04875 (dnaX)
03430 Mismatch repair
PP769_04875 (dnaX)
03440 Homologous recombination
PP769_04875 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nall03032
]
PP769_04875 (dnaX)
03400 DNA repair and recombination proteins [BR:
nall03400
]
PP769_04875 (dnaX)
Enzymes [BR:
nall01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PP769_04875 (dnaX)
DNA replication proteins [BR:
nall03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PP769_04875 (dnaX)
DNA repair and recombination proteins [BR:
nall03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PP769_04875 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_22
AAA_16
AAA_14
AAA_5
AAA_30
AAA_18
TIP49
AAA_assoc_2
RCF1-5-like_lid
PIF1
ECH_1
AAA_2
nSTAND3
TsaE
AAA_19
SKI
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
WNM59102
UniProt:
A0AA96GD16
LinkDB
All DBs
Position
complement(1116049..1117881)
Genome browser
AA seq
610 aa
AA seq
DB search
MEFQVSARKYRPTNFQEVLGQSHVVQTLTNAIDRRRVAHAYVFSGMRGVGKTTVARILAK
SLNCEQGPTSHPCGTCPSCVEITRGNSVDVIEIDGASNTGVDDVRELRENVKFAPFHGTY
RVYIIDEVHMLSNSAFNALLKTLEEPPSHSVFIFATTEVHKIPATILSRCQHFTFRRISR
LEIITQLRHIATQTGVTVEDRSLSALARASEGSMRDALSLLDQAVSFGGERIQHGDLEML
IGSVPDELVRLMIDAILGHQAAQTMALVGQLVDQGFDVRVYCRELLERCRNLLVACVVPS
RSQVQTLLELGDEEVDQTISQAQQLSEPYLQALFAIFSRTEDSLRGSSHPRFLIEAAVVR
AAMLDPVTVHSAMIEQKAGAPPQASVLQAKVLTPVASTPPPAHPVKVQAPADKPVTPPSQ
TRPRPGGGATTMFPSSTPPGAKKSIPTTASSANSETSVASPKTAAQPSSGPPVTLNWELV
VERMINDHPNIGSFLEKGSVVTMTADSVVLGYSKKDSIARWRTDKPENRVLIGQICEEFA
GRPIKVQVIEFQDGQAYPPSTGELRAKKKLEQDQDLIENVKAHPLVKQALELFGGEVVSA
ERTPQNEEVR
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggaatttcaagtttccgcacggaaataccgcccgaccaattttcaggaagtcctgggg
cagtcccatgtcgtgcaaacactcaccaatgcaatcgaccgcagacgggtcgcccatgcc
tatgttttctccggcatgcgaggagtcggcaaaaccactgtcgcgcgcatcctggccaaa
tcccttaactgtgaacagggtcccaccagccatccctgtggaacctgcccaagttgcgtc
gaaatcacccgaggcaattcggtggatgtcatcgagattgacggagcgtcgaatactggc
gtggacgatgtccgtgaactgcgtgaaaacgttaaatttgcaccatttcatggcacctac
cgtgtctacatcatcgacgaagtccacatgctgtccaactcggcttttaacgccctgctt
aaaacactggaggaacccccgagtcattccgtctttatttttgcgacaactgaagttcat
aaaattcctgccactatactttcacgctgtcagcacttcacctttcgacgcatttcccgc
ttagaaatcatcacgcaacttcgccacatcgccacccaaacgggagtgactgtggaggat
cgaagcttatcggcactggctcgagccagtgaaggcagtatgcgagacgcgttgagcctc
ctggatcaagccgtttccttcggtggagaacgcatccagcatggcgatttggaaatgttg
attgggtccgtgcccgacgaactcgtccgactcatgattgacgccatcctggggcaccag
gccgcccaaacaatggctctcgtggggcagttggtcgaccagggttttgatgtccgggtg
tattgccgggaactgttagagcgatgccgcaatctactggtggcttgtgtggtaccatca
cgctcacaagtgcaaacccttcttgaattaggagacgaggaggttgatcagaccatctcg
caagctcaacaactctccgagccctatttacaggccctttttgccattttttccagaaca
gaggacagtcttcgaggaagctcccatccacggtttctaattgaagccgccgtggtacgc
gcagcgatgcttgatcctgtgacagtacactccgccatgattgaacagaaggccggcgca
ccccctcaagcatccgtcctacaagcaaaggtattgacacccgttgcctcgactccgcct
cccgcacaccctgttaaagtccaagcgcctgcggataaaccggtgactcctccaagccag
acccgtcccaggcccggtggcggtgccacaacgatgtttccttcctcaacaccaccaggt
gcgaaaaagtcgataccgacaacggcctcatctgccaacagcgaaacctcggtggcctct
cccaaaacggctgctcaaccttcgtcgggcccacccgtgacattaaactgggaactcgtc
gttgagcgcatgattaatgaccatcctaatatcgggagcttcctggagaaggggagtgtc
gtaaccatgacagcagactccgtcgtcctgggttattccaaaaaagattcgattgctcgc
tggaggacggacaaacccgaaaaccgcgtgctgattggtcaaatatgtgaggaattcgcc
ggtcggccgataaaagtccaagtcattgaatttcaagatggccaagcttacccgccgtca
accggggaattacgagcaaaaaaaaaacttgagcaggaccaggatctcattgaaaacgtg
aaagcccacccactggtgaaacaagcattggaactatttgggggagaagtcgtatcggca
gaaagaaccccgcaaaacgaggaggtacgttaa
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