Candidatus Nitrospira allomarina: PP769_04930
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Entry
PP769_04930 CDS
T09427
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
nall
Candidatus Nitrospira allomarina
Brite
KEGG Orthology (KO) [BR:
nall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nall03019
]
PP769_04930
03009 Ribosome biogenesis [BR:
nall03009
]
PP769_04930
Messenger RNA biogenesis [BR:
nall03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PP769_04930
Ribosome biogenesis [BR:
nall03009
]
Prokaryotic type
rRNA processing factors
PP769_04930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
WNM59110
UniProt:
A0AA96GF73
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All DBs
Position
complement(1127269..1128822)
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AA seq
517 aa
AA seq
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MGVEIAISVTREETRVAVLDNRVVTELYVDRPRKKDFVGDIYKGKVIKVLPGMQAAFVDI
GLDRAAFIHVSDLSVGTEPGDTLVDSEEDERSQEVPRPRRQTARPIENLLTEGQELLVQI
SKGPIGTKGPRITTYVSLPGRFLVLMPNVDHIGVSRRITNDEERHRLKDLMRRIRKPEYG
YIVRTVCEDVPEEDLQTDVRFLSALWEDTLKAANSQPAPSLLHTDLSLPLRVVRDLFTKK
VDRLLIDAKADFEEVKDFVRRYLPEQAARVHFYDKKQEGLFDHLGIELEITRALSRKVWL
KSGGHIVIDHTEAMTVVDVNTGRFVGKRDQEETILKNNLEAAKEIGYQIKLRGIGGIIII
DFIDMERERNREKVYQATLDALAGDKAQTRISRISDLGLIEISRERVREDLLRTLSEICS
DCEGRGYTKSTMTVAYEIFRDIRRIGMTRGQPQQIVVGANPKVIELIFETEHSSIEQLEQ
EFQQPISFEADPLLHLEQYDIVVVGKLTSRAESRTAS
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgggagtagaaattgcgattagtgtcactcgtgaagaaacacgggttgccgtgctcgac
aatcgtgtcgtaacagaattgtatgtcgaccgtccaagaaaaaaagattttgtcggggac
atttacaaaggcaaggtcattaaagttttgccgggtatgcaagcggcctttgtcgatatc
gggctggatcgggccgcatttatccacgtatctgatctatcggtcggaaccgaaccgggg
gacacacttgtggacagtgaagaggatgaacgcagtcaggaggtgccgcgccctcgacgc
caaaccgcacgtcccatcgaaaacctgttgacagaaggacaagaacttcttgtccaaatt
tccaaaggccccatcggcacgaagggacctcggattaccacgtacgtctcactccccggg
cgttttttagtgctcatgcccaatgtcgaccatattggcgtgtcgcgaagaataacgaac
gacgaagaacgtcatcggctgaaagatctcatgcggcgtatccggaaacccgaatatgga
tacattgtcaggaccgtgtgcgaagacgtaccagaagaggatttgcaaacagacgtcaga
ttcttgagcgccttatgggaagacacgcttaaagcggccaacagccaacctgctccatcc
cttttgcatacggatctgtccctcccgctccgggtggtgcgagacctattcaccaaaaaa
gtcgatcgactattaattgacgctaaagcggactttgaggaagtgaaagattttgtccgt
cgctatcttcccgaacaagcggcgcgcgttcatttctatgacaagaagcaggaaggatta
ttcgatcacctcgggatcgaattggaaattaccagagccctgagtcggaaggtctggctt
aagtccggaggacacattgttattgatcacacagaggccatgacggtggtggacgtcaat
acgggccgatttgtgggaaaacgcgaccaggaagaaaccattttaaaaaacaatctggaa
gccgcaaaggaaattggctatcagattaaattacgaggcattgggggcataatcatcatt
gatttcattgacatggaacgggaacggaaccgtgaaaaggtgtatcaggccaccctggac
gccctagcgggcgataaggctcaaacacgtatctcccgcatttctgatcttgggctgatc
gagatttcccgtgaacgtgtccgcgaagatctgttacggacgttgtcggaaatttgtagt
gactgtgaggggagaggatacaccaaatccaccatgacggtggcgtatgaaatttttcgg
gatatccggcgcatcggaatgactcgtggacaaccacaacaaattgtggttggtgccaac
cccaaagttattgagctcattttcgaaaccgaacacagtagcattgaacaactcgaacag
gaatttcaacaaccaatatcatttgaggcggatcctttactccaccttgagcaatatgac
atcgtcgtggtaggaaaattgacgtcacgtgccgaatcccgcaccgcatcctaa
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