Candidatus Nitrospira allomarina: PP769_04940
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Entry
PP769_04940 CDS
T09427
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
nall
Candidatus Nitrospira allomarina
Pathway
nall00550
Peptidoglycan biosynthesis
nall01100
Metabolic pathways
nall01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
nall00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PP769_04940 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PP769_04940 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nall01011
]
PP769_04940 (mrdA)
Enzymes [BR:
nall01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PP769_04940 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
nall01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PP769_04940 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WNM59112
UniProt:
A0AA96JT17
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All DBs
Position
complement(1130318..1132150)
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AA seq
610 aa
AA seq
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MLDTSRQANELADIQNRLIFVKIGFLMLLVLLGLRLWQLQVRDGLHYQELARDNRTRSIV
LEPARGLLYDRNGELLANNIPSFQLYVSLEDIQDREALLAQLPHYIDIDQQEISNKLSIK
SRRGRVKIKADITLKEAALIESHRLELPGVVIQPEYQRHYPLNNYASHVLGYVGEISESQ
LKDPEFSHLQGGRIIGQNGVERTFDEYLLGETGEEVIEVDALGYPKRSLSVRRPLAGDDL
YLTIDIRLQRLAEDLLGQEAGAIVALDPWNGDVLALASKPGFNPNDVSGGISAKDWQRFL
MDTRHPLTNRAIQGQYPPGSVFKIIMAAALLETHTLSAQEMVPCHGTFPFGRRVFRDWKA
GGHGQVDLTKAIAESCDVYFYKAGNQLGIDPIATYARQFGLGEKTGIALPSERSGLVPSS
EWKKRVKREPWYPGETISISIGQGFLTVTPIQMAKVAAIVATNGRVVQPRLLKASRLRRT
GTLKEKPEPPIRQLGIPPQTFAHIKEGLAAVVTKGTAKLAQSEFVSIAGKTGTAQVVALK
PDGDKDKNKEPQKEFRDHAWFVAFAPVEHPKIAVAVLVEHMGHGGSASAPLAKTIIEAYM
GFETTQEPSL
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgctggacacttcccgccaggctaatgaacttgccgatattcaaaatcggttaatattc
gtcaaaatcggatttctgatgctattggtgttgctggggttacgcctttggcaattgcag
gtgcgagacggattgcactatcaagaacttgcccgcgacaatcgcactcgatccattgtc
ttagaaccggctcgaggacttctatatgatcggaatggtgaactcctcgccaataatatc
cccagcttccaactgtatgtttctttggaagacatacaggaccgtgaggcccttttggct
cagttaccccattacatagatattgaccaacaagagatttccaataaactttcaataaaa
agccgaagaggccgagtcaagatcaaagccgacattacgctaaaagaggcggcactcata
gaatcgcaccggcttgaactccccggtgtggtaattcagccggaatatcagcgtcactat
ccccttaacaattacgcctcgcacgtcctggggtacgtgggtgaaatttccgaatcacag
cttaaagacccggaattttcccatcttcagggaggacgcatcattgggcaaaatggagtg
gagcgaacatttgatgaatatcttcttggagaaaccggagaggaagtgattgaagtcgat
gccttggggtatccaaaacgatctctctcagttcgtcgtcccctggccggggatgacctg
tacctgacgatcgacattcgacttcagcgcctcgcagaggaccttcttggacaggaagcg
ggggccattgttgccctggatccgtggaatggggacgttctggctctggcgagtaaaccc
gggtttaatcctaatgatgtttcaggagggattagtgccaaggattggcaacgatttctc
atggatacacgccaccctctcaccaatcgcgccattcaagggcaatatcctccagggtcg
gtatttaaaatcattatggccgcagccctcttggagactcacaccctcagcgcacaggaa
atggtaccctgccatggaacctttccttttggaaggcgagtctttcgtgattggaaggcg
ggaggccacggtcaggtcgacttaaccaaagctatcgcggaatcgtgcgatgtctacttt
tacaaagccggcaatcaattgggcattgatcccatcgccacctatgctcgtcaattcgga
ttaggtgaaaaaaccggaattgcgctcccttccgaacggtcgggtcttgttccatcctca
gaatggaaaaaaagggtcaaacgggaaccatggtatcctggcgaaaccatttccatttct
attggacaagggtttttaaccgtgactcccattcagatggccaaagttgcggccatcgta
gcaaccaatggacgagtggtccaaccccgtttgctcaaagcctctcgacttcggcgaacc
ggcacactcaaagaaaagccagagccacccattcgacaattgggtattcctccccaaacg
tttgcccatatcaaggaaggattggcggcagtcgtcacgaagggtacagccaaactggcg
caatcagaattcgtgagcattgcaggcaaaactggaacggcgcaagttgtcgccctgaaa
ccggatggagacaaggacaaaaacaaggagcctcaaaaagaatttcgagaccatgcgtgg
tttgtggcctttgctcccgtcgaacacccgaagattgccgtggcggtattagttgaacac
atggggcatggaggctcagcgtccgcccccttggccaagaccatcatcgaagcctatatg
ggctttgagacaacccaagagccttctctttga
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