Candidatus Nitrospira allomarina: PP769_06035
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Entry
PP769_06035 CDS
T09427
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
nall
Candidatus Nitrospira allomarina
Pathway
nall03030
DNA replication
nall03430
Mismatch repair
nall03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nall00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PP769_06035 (holA)
03430 Mismatch repair
PP769_06035 (holA)
03440 Homologous recombination
PP769_06035 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nall03032
]
PP769_06035 (holA)
03400 DNA repair and recombination proteins [BR:
nall03400
]
PP769_06035 (holA)
Enzymes [BR:
nall01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PP769_06035 (holA)
DNA replication proteins [BR:
nall03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PP769_06035 (holA)
DNA repair and recombination proteins [BR:
nall03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PP769_06035 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
WNM59323
UniProt:
A0AA96JTD1
LinkDB
All DBs
Position
1387313..1388401
Genome browser
AA seq
362 aa
AA seq
DB search
MKVHELQSQINRHGLSPLYLVIGEEPYFRDQALSILREAGQKKDASKSSDHLSAYDSSQM
FHVDVVYGDETDASEILAISEETSFFSSRRLLIIKWAEKLSARDGEALMPYFQTPNETTT
MVITAAKLDGRTKWVQDLKKRGTVVECAPLFEGQRAGWVTQRARELGLQLEDSALEILKD
QVAEGLYGTAGELEKLVAFMPEGHRVRAQDVETLRGKPPGISVFDWSEAVARGDQGRALD
IVAKNLETGEAPLRMLGAFLWQMRKIWKTHELMQEGYDAGQAARQSGIPPFRAREFIQQV
QRWKPSHLRRAWELFAQADSALKGGRASRPKLILDDLVIQLCRATKADQGSKVFGGRKSH
KL
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttcatgaacttcaaagtcagatcaaccggcatgggttatcccctctgtatttg
gtgattggggaagagccctatttccgggatcaggccttgagcattcttcgtgaggcaggt
cagaaaaaggatgcttcaaaatcatcggaccatttatcggcctatgattcctcccagatg
tttcatgtcgatgtcgtttatggggatgaaaccgatgcgtccgagatattagccatttcg
gaagagacctcgtttttttcatcgagacgactcctcatcattaaatgggcagaaaaactc
tctgctcgagatggggaagctcttatgccctattttcagactcccaatgaaacgaccacg
atggtcatcactgcagccaaactggacggccggacgaagtgggttcaagatcttaaaaag
cgggggacggtggtggaatgcgctcccttatttgaggggcagcgagcagggtgggtcacg
cagcgagcgcgagagttaggcttgcagttggaagacagtgccctcgagatattgaaggat
caggttgccgaagggttgtatgggacggccggtgaattagagaaattggtggcgtttatg
ccggagggccatcgagttcgggcacaagacgtggaaacgctcagaggaaaaccccctgga
atttcggtgtttgattggtcggaagccgttgcgcgaggggatcaggggcgggcattggat
atcgtggcaaaaaatttagaaaccggcgaagcacccttacgaatgttgggtgcctttttg
tggcagatgcggaagatctggaaaacgcacgagttgatgcaagaagggtatgatgccgga
caggccgcacgccaatcaggcattcctccgtttcgtgcgcgggaatttatccagcaggtg
cagcggtggaagccatcccacctccgtcgagcatgggaattattcgctcaagcggattcg
gctcttaaaggagggcgggcatcacgtccgaagctcatcttggatgacctggtcatccaa
ctttgccgggccactaaagctgatcaaggcagcaaggtcttcggtggccgcaaatctcac
aagttgtga
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