Candidatus Nitrospira allomarina: PP769_07135
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Entry
PP769_07135 CDS
T09427
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nall
Candidatus Nitrospira allomarina
Pathway
nall03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nall00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PP769_07135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nall03021
]
PP769_07135
03400 DNA repair and recombination proteins [BR:
nall03400
]
PP769_07135
Enzymes [BR:
nall01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PP769_07135
Transcription machinery [BR:
nall03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PP769_07135
DNA repair and recombination proteins [BR:
nall03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PP769_07135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
WNM59522
UniProt:
A0AA96GDW3
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All DBs
Position
1610790..1611776
Genome browser
AA seq
328 aa
AA seq
DB search
MINSMKDFQIPTKLELEKDSASPTYGKFTAEPFERGFGTTMGNSLRRVLLSSLPGAAVTS
VKIEGVYHEFSTIPGVTEDVTILILNIKALRLRLHSDKAKAIRLKKKGPGEVLAADLSVD
PDVVILNPDFHIATLDKDGMLDIELIVKPGRGYVPAERNKEEGLPIGVIPVDSVFSPIKR
VNFSVESARVGRITDYDKLILEVWTDGSISPQEAVTSAAGILRDHLDICLPSEERGEPAQ
EEGGDESKMLINQHLFRSVNELELSVRAANCLKNANIKSIGDLVQKSENEMLKTKNFGKK
SLNEIKEVLAEMGLALGTKVSEVTESHI
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgataaatagcatgaaggatttccaaataccaacgaagctggaattggaaaaggacagt
gcttcacctacttatggcaagtttacagctgagccatttgaacgagggtttgggaccacg
atggggaattcccttaggcgggttttactttcttcgctacctggggcggctgtcacctcc
gtaaaaattgagggggtatatcatgagttttcgaccattccaggtgtgaccgaggatgta
acgattctcattttaaacattaaagcattgcggttgcgtttacattccgataaggcgaag
gctatccgtttgaaaaagaaggggcctggcgaagtgttagccgcagatttgtctgtagac
ccggacgtggtaatcctgaatccagattttcatattgctactttagataaagatggaatg
ttagatattgaacttattgtgaagcccgggcgaggatatgtccccgcagaacgaaataaa
gaagagggattgccaataggagtcattccggtagactcagtcttttctcccattaaacgc
gttaatttcagtgtggaaagtgctcgggttggtcggattacggattacgataaactgatt
ttggaagtgtggaccgacggaagcatatctccacaggaagctgttacttccgcagcagga
attcttcgcgaccatttggatatttgcctcccatctgaagagaggggtgaaccagctcaa
gaagagggcggggatgagagcaagatgttgattaatcaacatctgtttcgaagtgtgaat
gaattggaactttcggttcgcgctgcaaattgcctaaaaaatgctaatattaaatctata
ggtgatttagttcaaaaaagcgaaaatgaaatgttgaagaccaaaaactttggtaaaaaa
tccttaaatgaaattaaagaggtcctagcggaaatggggttggccttaggaaccaaagtg
agcgaagtaacagaatcccatatctaa
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