Candidatus Nitrospira allomarina: PP769_09290
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Entry
PP769_09290 CDS
T09427
Name
(GenBank) mechanosensitive ion channel family protein
KO
K16052
MscS family membrane protein
Organism
nall
Candidatus Nitrospira allomarina
Brite
KEGG Orthology (KO) [BR:
nall00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nall02000
]
PP769_09290
Transporters [BR:
nall02000
]
Other transporters
Pores ion channels [TC:
1
]
PP769_09290
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
DUF8029
Msl2-3_C
CcmS-like
Motif
Other DBs
NCBI-ProteinID:
WNM59931
UniProt:
A0AA96GE25
LinkDB
All DBs
Position
complement(2108400..2109566)
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AA seq
388 aa
AA seq
DB search
MLQDFWQEILTVWQIGILHTTLGDIFLALGVFLAFLFVRRIVFRLFSRLLRRFTGRTKTD
MDDRILEAIERPLEFTFVIIGLYISGQVISLSPALGAIFGQIIRSLIAFTIFWAIFRILD
PLSALLDRSITLFGSQSMHETIKGFFLKVAKFVVVCLGIAAVFQEWGFNVAAVLGSLGLV
GMAVALGAQDFIKNMFAGFTIFLDRVFEKGNWIKTPDVEGTVEEIGFRATKVRQFDKALV
TLPNSKLANEALINYSRMTNRRIHWMIGIEYRSTHDQIRNIIQAISAYIYECGDFETNPE
KTKTFIFLDSFGNSSIDIKLYCFTKTIVWGEWLEAKERLAYKIKEIVEGEKASFAFPSSS
IYVESLPFGTPESFMPPRSRAPSSPSPT
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaagatttttggcaagaaattctgacggtctggcagatcggcattttacatacc
accctgggtgatatttttcttgccttaggtgtatttctggcattcttgtttgtccgtcga
attgttttccgtcttttttcacgtctcttgcgacgatttaccggacgaaccaaaacggac
atggacgatcgcatcctggaagccattgaacgcccgcttgaattcacgtttgtcattatt
ggtctgtacatttccggacaggtcatctccttgtcgcccgcgttgggtgcgatctttgga
caaatcatccggtccttgattgccttcacgatcttttgggctatttttcgaatactggat
ccgctgtccgccctactggatcgatccatcacactcttcggcagccaaagcatgcacgaa
accattaaggggtttttcctcaaggtcgcaaagttcgtggtggtctgcctaggcattgcc
gcggtgtttcaggaatggggattcaatgtcgcggcggtcctcggtagcttgggactggtc
ggcatggcagtcgccctcggcgctcaggatttcattaagaatatgttcgcgggattcacg
atatttttggaccgggtctttgaaaaaggcaactggatcaaaacgcctgacgtagaaggc
acggtggaagaaattggatttcgtgcgacaaaggtccgtcaattcgacaaagccctggtc
acacttcccaattccaaattggccaatgaagcgttaatcaactactcccgcatgacgaac
cggagaattcattggatgatcgggatcgagtatcgctcgactcatgaccaaattcgaaat
attatccaagccatttcggcctatatttacgaatgtggtgactttgaaaccaatcccgaa
aagaccaaaacatttatttttctggattcattcggtaactccagcattgacattaaactg
tattgttttacgaagaccattgtgtggggtgagtggttggaagccaaagaacgcttggca
tacaaaatcaaggaaatcgtcgagggcgagaaggccagttttgcgtttccatcgagttcc
atctatgtcgaaagtctgccattcggcacaccagaatctttcatgcctccccgctcccgg
gcgccttcttctccatcgccaacatag
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