Candidatus Nitrospira allomarina: PP769_10370
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Entry
PP769_10370 CDS
T09427
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nall
Candidatus Nitrospira allomarina
Brite
KEGG Orthology (KO) [BR:
nall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nall03032
]
PP769_10370
03400 DNA repair and recombination proteins [BR:
nall03400
]
PP769_10370
Enzymes [BR:
nall01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PP769_10370
DNA replication proteins [BR:
nall03032
]
Prokaryotic type
DNA Topoisomerases
PP769_10370
DNA repair and recombination proteins [BR:
nall03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PP769_10370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Ribosomal_L40e
Motif
Other DBs
NCBI-ProteinID:
WNM56389
UniProt:
A0AA96GCU4
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All DBs
Position
2342033..2343148
Genome browser
AA seq
371 aa
AA seq
DB search
MTVKASPAPLDNPNISAKAAGLRYVTDECPGLVRKRAGKGFRYVGHNGRQVRNPHVLGRI
KALAIPPAWQDVWICSNPDGHLQATGRDSKGRKQYRYHPQWRRIRDEAKYEHLTAFAQAL
PRIRRIVKRDLSQKGLPRTKILATIVRLLETSLIRVGNVAYARDNESFGLTTMRDRHVKV
KGSTLTFQFKGKSGIDHAVDLTDPRLAKIVRQSQELPGYELFQYLDENGAKQSIESTDVN
AYLREITGQDFTAKDFRTWAGTVLAARALQEFQSFDSQAQAKRNVVRAIESVAKRLGNTK
AVCQKCYVHPHVLNAYMEGTLLQTLRKRVNRELSQSLRGLPAEEAAVLTLLQQQLKSEKR
PNKNTSRNGKM
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtgaaggcatcacctgcgcctttagacaatccgaatatttcggcgaaagctgcc
ggactacgctatgtcacggatgaatgcccgggcctagtacggaagcgagcaggaaaagga
tttcgttatgttggacataacggccgacaagtccgtaatcctcacgtactagggcgcatt
aaagctttggccattccgcctgcgtggcaggatgtgtggatttgttcgaacccggacgga
cacctacaggctacgggacgggattcgaaaggccgtaagcaatatcggtatcatccgcag
tggaggagaattcgggatgaggctaaatatgaacatctgacggcttttgcccaagcattg
cctcgtattcggaggatcgttaaaagggatctttctcaaaaagggttaccgcgaaccaaa
attctggcgacgatcgtccggcttcttgaaacttctttgattcgagtcggaaacgtagcc
tatgcgcgtgacaatgagtccttcgggttaacaaccatgagggaccggcatgtcaaggtg
aagggctccaccctcacatttcaatttaaagggaaaagtggcatcgatcacgccgtcgat
cttaccgatccacggttagcgaaaatcgtcaggcaatcgcaagagctacccggctatgaa
ctctttcaatatctcgatgagaatggtgccaagcaatccatcgaatccacggatgtgaac
gcgtatctcagggaaattaccggacaggattttaccgccaaggattttcgcacgtgggcc
gggacagtcctggcggccagagcccttcaggagtttcaatcgtttgactctcaagctcag
gcaaaacgaaatgtggtacgggccatcgagtctgtggccaaacgactgggtaatacgaaa
gcggtctgtcagaaatgttatgtccaccctcatgtgctgaacgcgtatatggaaggcact
ctcctccaaacacttcgcaaacgggtgaatcgggaactttctcaatcgcttcgtgggtta
cctgcggaggaagcggctgtgttgacgttgcttcaacagcaattaaagtctgaaaaacgg
ccaaacaagaatacatccaggaacggaaagatgtaa
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