Candidatus Nitrospira allomarina: PP769_12275
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Entry
PP769_12275 CDS
T09427
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
nall
Candidatus Nitrospira allomarina
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Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
Mg_chelatase
AAA
AAA_16
HTH_30
AAA_2
AAA_3
MCM
HTH_28
AAA_22
AAA_7
nSTAND6
Motif
Other DBs
NCBI-ProteinID:
WNM56752
UniProt:
A0AA96G987
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Position
2763194..2764582
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AA seq
462 aa
AA seq
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MIDTEGGVGRGILVVEDDEQLQSALTHALSQHGYAVTVARDGYEGLERMEREAPWLVLTD
LNLPGKGGMDFLREVRSQGYHMPVVVMTAYGGVDAAVEALKYGATDFLQKPFPLDRLEKL
VDQLKDAQPVSGLEVLREQERCRREEPREGFLTRDPKVLHTITMLEMVAASPATILIQGE
SGTGKEVLARHVHRHSPRASQPFVAINCAALPEGLLESELFGYEKGAFTGALARRCGKFE
LAHQGTLLLDEIGEMSLGLQAKLLRVLQEREVDRLGSRQPVQVDVRVIATTNRNLAQEVQ
AGRFREDVYYRLSVMPFTIPPLRDRPEDVQLLAEYFANRSLRRNRRTPCEISEEAMAYLK
RRPWRGNVRELENVIERGVLLAGNGPLLIEHFQFEEPMLAANHASAPSGTIWEMERELIL
RTLERHDGNRTHAARTLGISIRTLRNKLREYRQLNGGLSLGI
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgatcgataccgagggtggagtgggccggggtattctggtcgttgaagatgatgaacag
ttgcaatcggccctgactcacgcgttgagtcagcatgggtatgccgtcacggtcgccaga
gatggctatgaaggattggagcggatggaacgtgaggccccatggctggtgctgactgat
ctgaatttgcccggcaaaggagggatggattttttacgagaagtccgaagccagggttac
catatgccggtggtggttatgactgcttatggtggagtggatgcagccgtcgaggccctc
aaatatggagcaaccgattttcttcaaaaaccctttccccttgatcgtcttgaaaaatta
gttgaccagttgaaagatgcgcagcctgtttcggggctggaggttctgagagaacaggaa
cgatgtcgccgtgaagagccgcgtgaaggatttctgaccagggatccgaaagtgttgcac
actatcaccatgttggagatggtggcggccagcccggcaaccattttgattcaaggcgaa
agcggcacgggtaaggaagtcctggcccggcatgtccatcgtcatagtcccagggcttct
caaccatttgtggcgatcaattgtgccgccctgccggaaggactcttggaaagtgaattg
tttggctatgaaaagggggcttttaccggcgcgctggcgagacgatgcggcaagtttgaa
ttggcccaccagggaacgttgttgttggatgaaatcggagaaatgagtttggggttacaa
gccaaattactcagggtccttcaagaacgtgaagtggatcgccttggctccaggcagccg
gtgcaggtggatgtgcgggtcattgccacgactaatcggaatctggcgcaggaagttcag
gccggccggtttcgtgaggatgtgtattaccggctgagtgtcatgccgtttaccattccc
ccgttgcgtgatcgcccggaggacgttcaattattggcggaatattttgccaaccggtca
ttgcggcgaaaccggcgcacgccgtgcgagatctcagaagaggcgatggcttatttgaaa
cggcggccgtggcgaggaaatgtacgcgaattggaaaatgtgattgagcggggtgtgtta
ttagcgggcaatgggccattactgattgagcattttcagtttgaagaacccatgttggcg
gccaatcatgccagtgcgccaagtgggactatctgggaaatggaacgggaacttattttg
agaactctggagcgccatgatggaaatcggactcatgcggccaggacattgggtatcagt
attcgtaccttacggaataaattacgggaatatcgacagttaaacgggggactttccctg
ggtatttaa
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