Candidatus Nitrospira allomarina: PP769_12395
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Entry
PP769_12395 CDS
T09427
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
nall
Candidatus Nitrospira allomarina
Pathway
nall02020
Two-component system
nall02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nall00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PP769_12395
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PP769_12395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nall03021
]
PP769_12395
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
nall02035
]
PP769_12395
Transcription machinery [BR:
nall03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PP769_12395
Bacterial motility proteins [BR:
nall02035
]
Flagellar system
Flagellar assembly proteins
Stator
PP769_12395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
AAA_16
UPF0122
LexA_DNA_bind
DprA_WH
Motif
Other DBs
NCBI-ProteinID:
WNM56776
UniProt:
A0AA96JVD1
LinkDB
All DBs
Position
2786591..2787385
Genome browser
AA seq
264 aa
AA seq
DB search
MKRGAVTTVSESPVSEKPASSNPTKLSLSTQERETLVQEFLPVIKYMAMRMAMRASSGLN
VEDLMSAGMVGLLDALTKFDPSREIKFRTYAEFRIRGAMLDEIRAMDWVPRSLRERIGKI
QHAANEWTKRKGRPPTEDELAESLGMEAQEVDETLLQAKGAVVLSLDDLGSNDEDSHPIL
DALADRDQPSPLETLVSEDARQALVDAIERLPERQRLVLTLYYFEELTMKEIGVVLHVTE
SRICQLHAQAMIRLKALLHTRLGP
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtggcgcggtaacaacggtttcagagagcccggtttcggagaaaccggcatcg
tccaatccgacgaaactttcgctttccacccaggagcgtgagacgttggttcaggagttt
ttgccggtaattaaatacatggctatgcgaatggccatgcgggcgtcgagtgggctcaat
gtggaagatctcatgagtgccgggatggtcgggcttctggatgccctgacgaagttcgat
ccctcacgagaaataaaatttcgtacctatgctgagtttcgtattcgtggagcgatgctc
gatgaaatccgggcgatggactgggtcccgcggtctcttcgggaacgcatcggaaaaatt
cagcatgcggccaatgaatggacgaaacgcaaagggcgtccaccgacggaggatgagctc
gcagaatccttaggcatggaggctcaagaggtggacgagactcttttgcaagccaaagga
gccgtcgtattaagtctcgatgatttgggctccaatgatgaagactcccatcccatcttg
gatgcgctggcggatcgagaccaaccctccccgttggaaactttggtctcggaggatgcc
cgccaggcgttggtcgatgccattgagcgattgccggaacgtcaacggttggtgctgacc
ctctattattttgaagagctgaccatgaaagaaattggagtcgtattgcacgtcacggaa
tcacgaatttgtcagttacatgcccaagccatgattcgtctgaaggcccttctccatacc
cggcttggtccgtag
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