Candidatus Nitrospira allomarina: PP769_15810
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Entry
PP769_15810 CDS
T09427
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
nall
Candidatus Nitrospira allomarina
Pathway
nall02020
Two-component system
nall02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nall00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PP769_15810
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PP769_15810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nall03021
]
PP769_15810
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
nall02035
]
PP769_15810
Transcription machinery [BR:
nall03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PP769_15810
Bacterial motility proteins [BR:
nall02035
]
Flagellar system
Flagellar assembly proteins
Stator
PP769_15810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
LexA_DNA_bind
GerE
Sigma70_ECF
GcrA
MarR_2
T1RH-like_C
Motif
Other DBs
NCBI-ProteinID:
WNM57419
UniProt:
A0AA96JYD7
LinkDB
All DBs
Position
complement(3555111..3555989)
Genome browser
AA seq
292 aa
AA seq
DB search
MNEDAQSFTKTAVGIKELGSSHLGSVSPKNAEHTEAQVQLDQEHVTRILLEFLPTIRRMA
GIMAFRNPFSLDVEDLTSAGAMGLLSALKRYDPTRDIKFRTFAEYRIRGMMLDEIRSMDW
VPRSVRSRRDQVRQKVEEHLQKNGMPPTTQELATLLGVPIEEVEGVGGCDPRLISLDEPV
GQGEDECTLRDVLPDVNHLDPFVACADAEMKAALSAALQTLSARQQEVLQSYYHAGLTMK
EIGRQMGLTESGVCRVHSGAIRHLRIELKRIEDGESRAPRPRNLRKTPVVRD
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagacgcacaatctttcacaaagacagcagttggtattaaagaactcggctcg
tctcacctcggttcggttagtccgaaaaatgcagaacatacggaagcacaggtccagctc
gatcaggaacatgttacccggattttattagagtttctcccgacgattcgtcggatggct
ggaattatggcattcaggaatcccttttccctggatgtcgaggatttgaccagcgcaggg
gctatggggctgttgtcggcgttgaagcgctatgatccaacacgcgatattaaatttcgc
acatttgccgaatatcgcattcgtgggatgatgttagatgaaattcggtcgatggattgg
gttcctcggtctgtgcgatctcgccgagatcaagtgcgacaaaaagttgaagagcatctt
cagaaaaatgggatgccaccgaccacacaggaattggccaccctgttgggcgtacccatt
gaagaagtagaaggagtgggcgggtgtgatcctcgtttaattagtctggatgagccggtt
gggcagggagaagatgaatgtaccctccgtgatgttttgccggatgttaaccatctggac
ccttttgtggcttgtgcggatgcagaaatgaaagcggcattgtcagcggccctacagaca
ttatcggcccgccagcaagaggtgcttcaatcgtattatcatgccggattgacgatgaaa
gaaattgggcggcaaatgggtctgaccgagtctggggtctgtcgggtgcattccggtgcc
attcgacacctccgcatagagttgaaacgtattgaggatggggaatcccgggcgcctcga
cccaggaatttgcgaaaaacgcctgttgttcgcgactaa
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