Candidatus Nitrospira allomarina: PP769_15845
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Entry
PP769_15845 CDS
T09427
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
nall
Candidatus Nitrospira allomarina
Brite
KEGG Orthology (KO) [BR:
nall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nall03009
]
PP769_15845
Enzymes [BR:
nall01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
PP769_15845
Ribosome biogenesis [BR:
nall03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PP769_15845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
WNM57426
UniProt:
A0AA96G9K7
LinkDB
All DBs
Position
3565779..3567017
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AA seq
412 aa
AA seq
DB search
MIQAEKTVRLQKIIARSGVASRRKAEELIQHGMVTVNGETVMTLGTKVDPAVDHIKVEGR
HLKSRPPDMFLMLNKPVGYISTLHDPAGRPTIKALVPKPSIRLFPVGRLDYDSEGLLLLT
NNGDIAQACLHPAHHVHKTYLVKIKGILEEPEIQKLRHGLMLEDGLTAPAKVKKAGKAAA
NSWVEITVHEGRKHQIKRMFEQIGHPVIRLKRVQFGPLNLGTLPPGQTRYLTDKEANDLR
HLLIAPESPGPTVRQPKAALMRLSRPAAQLRPRPSTPNSNRSKNIASPAQRAGQPQPWTP
THPPIKKTEKFPPSRPAAPSRPRSPNPNSIKRRSTSTSAETIGQAGAHRSKDQQIKRMEN
FPKSGPAGQFWPRQGNPKPIRSKKTISTPGTNGNARPRRPGVTSKSRFKFKS
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgattcaggcagagaaaacagtccgtttacaaaaaatcatcgcccgttccggagtcgct
tccagacgcaaggctgaggaactgatccaacatgggatggtcaccgttaacggagaaacc
gtcatgacgctagggaccaaagttgatcctgcggtcgaccacatcaaggtcgaagggcgc
catctgaagtcccgacctcctgacatgtttctcatgcttaataagccagtgggatacatc
tccaccttgcatgatcctgcggggcgccccacgattaaagccttggttccgaaaccttcc
atacggctattccctgtcggacgcttagattatgatagtgaaggcttacttctgctcacc
aataacggtgatattgcacaagcctgccttcaccccgcacaccatgtccataaaacatac
ctggtgaaaattaaaggtattttagaggaacctgaaatccaaaaactccgccatgggctg
atgttggaagatggactcacagctcccgccaaagtcaaaaaggccggaaaagcggcggct
aattcctgggtggaaatcaccgtccatgaaggacgtaaacaccagatcaaacgaatgttt
gagcaaatcggccatcccgtgatccggttaaaacgcgttcagtttggacctctgaacctt
ggaacccttcccccaggccagacgcgatatttaacagataaggaagcaaacgacttacgc
catttactcatcgcacctgaatcgccaggtccgactgtccgccagccgaaagctgcattg
atgcgcctatcgagacctgcagctcaattacgaccacgcccctcaacccccaattccaac
agaagcaagaacatcgcgtcacctgcccaaagggctggccaaccacaaccatggacacca
actcatccgccgattaagaaaacggaaaaattccctccatccagacctgcggctccttcg
cgaccacgctcaccaaacccgaattctatcaaaagaaggagcacttcgacgtctgcggaa
acgattggccaagcaggggcccaccgatccaaagatcaacagatcaaaagaatggaaaat
tttcctaaatcgggacccgctggtcagttttggccacgccagggaaacccgaaacccatc
aggagtaagaagacgatctcaacccctggcacaaacggcaatgcacggccccgccgaccc
ggcgtcacatcaaaaagccggttcaagtttaaatcttaa
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