Candidatus Nitrospira allomarina: PP769_15980 Help Entry PP769_15980       CDS       T09427                                  Name (GenBank) DEAD/DEAH box helicase   KO K11927   ATP-dependent RNA helicase RhlE [EC:5.6.2.7] Organism nall  Candidatus Nitrospira allomarina Pathway nall03018   RNA degradation Brite KEGG Orthology (KO) [BR:nall00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     PP769_15980  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:nall03019]     PP769_15980 Enzymes [BR:nall01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      PP769_15980 Messenger RNA biogenesis [BR:nall03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Helicases      PP769_15980 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD Helicase_C ResIII AAA_19 Cas3-like_C_2 Methyltr_RsmB-F HEM4 AAA_30 Motif Other DBs NCBI-ProteinID:  WNM57451 UniProt:  A0AA96JW32 LinkDB All DBs Position complement(3600735..3602006) Genome browser AA seq 423 aa AA seqDB search MSSTALSQFGALGVSATLVGVLNKLGITEPTPIQIQAIPPALEGRDVLGCAQTGTGKTAA FAIPIIERLAGGPKGHPRAMILAPTRELAFQIQETVDKYGRVRGIFATTLVGGADMNAQV RGLRQRPDIIVATPGRLLDHMWQGTVSFAKLQMVVLDEADRMLDMGFAPQLNQIIEALPE TRQTLLFSATMPNNLADLARMSLNDPFKALVAKSATPAEGVTHTVHHTANSDKTSLLLSI LKETEGSVLVFTRTKHRADRIGETLEKVGCRVAVLHAGRRLPQRRAALEGFRRGRFEILV ATDIAARGLDVDDIQHVINYDLPHVPEDYIHRIGRTARKNTKGWATSFVTGEDNRSLRMI EKLLGKAVPCAPGSRPPMPAIAPERRGPRPNSAGRGFGAPRSGSPGRHDRPAVRRPRPST LAS NT seq 1272 nt NT seq  +upstreamnt  +downstreamnt atgtcttcaactgcgttgtcacagtttggtgcgcttggtgtgtctgctacattggttggg gttttgaacaaactcggtataactgaaccgactccgattcaaatccaagccattcctccg gccttggaaggtcgggatgtgctgggttgtgcccagaccggcaccggaaagactgccgcc tttgccattcccatcattgaacgattggcaggtggtccgaagggccacccacgtgcgatg attttagcgccaaccagggaattggcttttcaaattcaagaaaccgttgataagtatggg cgcgtgcgcgggatttttgcgactactctggtgggtggtgcggatatgaacgcgcaagtt cgcggattacggcagcgtcccgatatcatcgtcgcgacgccgggacgcctcctcgaccat atgtggcaggggacggtttcgtttgccaagcttcagatggttgttctggacgaagccgat cggatgcttgatatggggtttgcccctcagcttaatcaaatcattgaggcgttaccggaa acccggcaaaccttactcttctcggctacgatgccaaataacttggcggatttggcgcgg atgtctctcaacgatccgtttaaagccctggtggcgaaatcggccacaccggctgaaggg gtgactcataccgtgcatcacacggccaattccgacaaaacatccctcctgctttctatt ttaaaggagacagagggatcggtccttgtctttacccggaccaaacatcgcgctgatcgg atcggggaaaccctggaaaaggtcggttgtcgtgttgcagtgttgcatgccggccgacgg cttcctcaacgtcgagcggcgctagaagggtttcgtcgtggacgttttgaaatattagtc gcgactgatattgcggcccgaggattggacgtggacgatattcaacatgtgatcaactat gatttaccccatgtgcctgaggattatattcatcgtattggtcggacggcgcgtaagaat accaaaggttgggccacgagttttgtgaccggtgaagacaatcgttcattacgaatgatt gaaaaattgctgggtaaggcggttccctgcgctcccggaagccgtccgccaatgccggcc attgcaccggagagacgtgggcctcggcctaattccgcgggtagaggatttggtgctcct cgttcggggagccctggcaggcatgatcgaccggccgttcgtcgaccgcgtccgtcaacc ttagcttcctaa

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