Candidatus Nitrospira allomarina: PP769_19155
Help
Entry
PP769_19155 CDS
T09427
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nall
Candidatus Nitrospira allomarina
Pathway
nall03030
DNA replication
nall03430
Mismatch repair
nall03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nall00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PP769_19155
03430 Mismatch repair
PP769_19155
03440 Homologous recombination
PP769_19155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nall03032
]
PP769_19155
03400 DNA repair and recombination proteins [BR:
nall03400
]
PP769_19155
Enzymes [BR:
nall01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PP769_19155
DNA replication proteins [BR:
nall03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PP769_19155
DNA repair and recombination proteins [BR:
nall03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PP769_19155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
WNM58062
UniProt:
A0AA96JRZ2
LinkDB
All DBs
Position
4401425..4404889
Genome browser
AA seq
1154 aa
AA seq
DB search
MPAQFVHLHLHTQYSLLDGANQLTPLFQQVKNFGMPAVAMTDHGNLFGAIDFYQKAKAHD
VKPIIGCEAYMAPGHRTQRAGHLAHNEYFHLILLATNQVGYHNLIKLSSKAYLEGFYYKP
RMDKELLQEHQEGLIALSGCLSGEVPQLINHQDMEGALRVADEYRSIFGKDRYYLEVQAN
GLDHQLTANRGLLEIHEKLGIPLVGTNDCHYLNKRDARPHEIMLCLQTGKTLKDPNRMKF
DTDQLYVKSTEEMIAEFAEFNRAVLNTTQVAEQCDLQLEFGTSYLPDYHVPEGQTHNSYL
QHLAEDGLRSRLRERPTGIPSEAYQQRLHTELAVLNAMGYAGYFLVVWDIINFARSRNIP
VGPGRGSAAGSLVAYALRITDLDPLTYNLLFERFLNPERVTMPDIDMDFCMDRRGEVINY
VIEKYGEAHVCQIITFGTLGAKAAIRDVGRVMDFPYAEVDRVAKLVPTQLNITLQDALKQ
EPRLQELVDQDANMKELMDTAMALEGLARHASTHAAGVVISQKPLMDHVPLYKTSNDEIV
TQYTMTDLEKVGLVKFDFLGLKTLTMIHDAVRMVNAQHPDEPPLDINNLPLNDLQTFELL
SSGKTSGIFQLESSGMRNLLVKIKPETFEDLIAILALYRPGPLESGMVDDFIKRKRDASQ
IVYDPPQLEPILKETYGVIVYQEQVMAVANQLAGFSLGQADLLRRAMGKKKHEEMAKQKA
LFVSGAKGKGISEKLSEKLFDQMAFFAGYGFNKSHSAAYAVVTYQTAYLKAHFPTEFMAA
LLTSEMGNTDKMVGYFTECRELGVHILPPDANQSLKNFSVVPEGIRFGLVAIKNVGGNAV
DVILESRDREGPFSSFIDFCCRIDSQKVNKRVLEGLIKVGAFDSMGFTRASMYKVLDEAL
DHASTVQRNKREGQTSLFEILAPEPAAPKQEGFGFVIPQIPEWSQNDLLKYERELTGFYI
TAHPLNRHSVGITHFSTCSTQTIRDVGDGREVKVCGVISSLKITTTKKGHRMAYAQLEDL
HGTVEAIIFPETFKQHEELLGPESVVRITGTVDLMDNGARIKTTKVESLSQLENETVKHV
TLKVHEQDVSPHNLLDLKDIFERHRGPTPISLAFHLHPNLTASMSGLSDIGISPSPEFLE
EVEHLLGASTVTFQ
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
gtgccagcacaattcgttcatcttcatcttcacacacagtatagtctcctcgacggggcc
aaccaactgacacccctgttccaacaggtgaagaattttggtatgcccgccgtcgccatg
actgaccatggcaatctcttcggcgccattgatttttatcaaaaggccaaagctcacgat
gtcaagccgattatcgggtgtgaagcctatatggctccggggcaccggacgcaacgtgca
gggcaccttgcgcataacgaatattttcatctgattcttcttgccacgaatcaagtcggc
tatcacaacctcattaaactctccagcaaggcctatcttgaaggcttttattacaagcct
cgcatggacaaggaattattacaggaacatcaggaaggtctcattgccctgtcagggtgt
ttgagcggagaggtaccacagctcattaatcaccaggatatggaaggggctctccgggtg
gccgatgagtatcggtcaatctttggaaaggaccgctattacctggaagtccaggccaac
ggcttggatcatcaacttactgcgaatcgagggttgctggaaattcatgaaaagcttggc
attccactggtcggcaccaacgattgccattatctcaataaacgagatgcgcgtccccat
gagatcatgttgtgccttcaaacgggaaaaacgctcaaagatcccaaccggatgaagttc
gacactgatcaattatatgtgaaatccactgaagaaatgatcgcggaatttgccgaattt
aaccgggcggtcttgaataccacccaggtggccgaacagtgcgatcttcaattggagttc
ggaacctcctatttgccggattatcacgttcctgaaggccagactcataattcctacctt
cagcatcttgcggaagacggtcttcgaagccggttacgagaacgcccaacgggcatccca
tccgaggcctatcaacagcgactccacaccgaactggctgtcctgaacgccatggggtat
gccggatattttttagttgtgtgggatatcatcaattttgccagatcccgcaacattccg
gtcggccccgggcgaggatcggccgccggaagccttgtggcatacgccctgagaattacg
gacctcgatcccctcacctacaacctgctctttgaacgttttctcaaccccgaacgtgtc
accatgccggatatcgacatggacttttgcatggaccgccgtggcgaagtgatcaactat
gtcattgagaagtacggagaggcgcatgtatgccagatcattacctttggcacactaggt
gccaaagcggccatccgggatgtggggagagtgatggactttccctatgccgaagttgac
cgggtcgcgaagctggttcccacgcaactcaacatcacactccaggatgccctgaaacag
gaaccacgcctgcaggaacttgtcgatcaagatgccaacatgaaggaactcatggacacg
gccatggccctggaaggcctggcgcgacatgcgtcgactcatgcggcgggagtggtcatt
tcgcaaaaaccccttatggatcatgtgcccctctacaaaacaagtaacgacgaaatcgtg
acccaatacacgatgaccgatctggaaaaagtcgggttggtgaaatttgattttctgggg
cttaaaaccctgacgatgattcatgacgcagttcggatggtcaatgctcaacatcctgat
gagccgccattggacatcaacaatctgcccttgaatgatctccagacgtttgagctgctc
agctccggaaaaacttcaggaattttccaactggaaagttccggcatgcgaaacctgttg
gttaaaatcaagccggaaacgtttgaagatctgatcgccatcctcgcgctctatcgtccc
ggccccttagaaagcggcatggtggacgatttcatcaagcgaaaacgggacgcctcccaa
attgtctatgaccctccgcaattggaacccattctcaaagaaacctatggggtgatcgtt
taccaggaacaggtcatggccgtcgccaaccagttggcaggattttcattggggcaagcg
gatttactccgccgggcgatgggcaagaaaaaacatgaggaaatggccaaacaaaaggca
ttgtttgtctcgggcgcgaaaggaaagggaatttcggaaaaactctctgaaaaattattt
gaccaaatggcctttttcgcaggctacggatttaacaagtctcactccgctgcctacgcg
gtcgtgacataccaaacggcttacctgaaagcccatttccccactgaatttatggccgcc
ctgctgacatctgaaatgggaaataccgacaagatggtcggctattttaccgaatgtcgt
gaattgggggtacacatcctgccccccgatgccaaccagagcttaaaaaatttcagtgtc
gtgcctgagggtatccggttcgggttagtggcgatcaagaacgtcggcggaaacgccgtg
gacgtgattttggaatcacgagaccgggaaggcccattttcctcctttattgatttttgt
tgccgcattgattcgcaaaaggtcaacaaacgggtgctggaaggactcatcaaggtcgga
gcctttgattccatgggtttcacgcgcgccagcatgtataaggtcctggatgaagccttg
gaccatgcctcgacggtccaacgcaacaaacgggaaggacaaaccagtctgtttgaaata
ctggctccggagccggcagcccccaagcaggaaggttttggtttcgtcattccacagatt
cccgagtggtctcagaatgacttactcaaatatgaacgagagctgaccggcttttatatc
accgcgcatcctctcaaccgccacagcgttgggatcactcatttttctacctgctccacc
cagaccattcgcgacgtcggcgacggacgagaggtcaaagtctgcggggtcatttccagt
ctcaaaattacgacgacgaaaaaaggccacaggatggcttatgcccaattggaagacttg
cacggaaccgttgaagcgattattttccctgagacctttaagcagcacgaagaattattg
gggccggaatcggtggttcggattaccgggaccgtggacctgatggataatggcgcccgg
atcaaaaccaccaaagtcgaatcgctctcccaattagaaaatgaaacggtgaagcatgtg
acgctcaaggtccacgaacaggacgtttccccccacaatctgctagacttaaaagacata
ttcgaacgccaccgcggtccgacccctatttcgttggcgtttcacttgcaccctaatctg
acggccagcatgtcgggattatcggatatcggcatttctccgtcaccggagtttttagaa
gaagtggaacatctcctcggcgcatccacggtcaccttccaataa
DBGET
integrated database retrieval system
