Nautilia profundicola: NAMH_0296
Help
Entry
NAMH_0296 CDS
T00860
Symbol
uvrA
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
nam
Nautilia profundicola
Pathway
nam03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NAMH_0296 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nam03400
]
NAMH_0296 (uvrA)
DNA repair and recombination proteins [BR:
nam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NAMH_0296 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NAMH_0296 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_29
nSTAND1
RsgA_GTPase
AAA_16
nSTAND3
AAA_21
AAA_33
AAA_25
DnaJ_CXXCXGXG
APS_kinase
Viral_helicase1
ExoX-like_C
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ACM92390
UniProt:
B9L7W1
LinkDB
All DBs
Position
complement(255705..258515)
Genome browser
AA seq
936 aa
AA seq
DB search
MDKIKIIGARENNLKNINLEIPKNKLIVFTGLSGSGKSTLAFDTLYAEGQRRYIESLSSY
ARQFLQKTGKPEVDKIDGLTPAIAIDQKTTSKNPRSTVGTVTEIYDYLRLLYARIGIQHC
HLCGKQITQMTPQDIINEVLKLPEGAKIIIYAPIVKEKKGEFHDLIEKLRKEGIIRAYID
GVIVRLDEEIELKKTKKHTIKAVIDRVIVKEENKSRIAEAVEKALNKSFGEVEIEILNAK
DLGLERDFIHYSEHLACFDCKISFEELEPVSFSFNSPKGACPKCDGLGVTYTLDIEKVIK
DKPLNKGSIPLIWGFNKKYYQEFFKALCRELDIDMNKSFFELDDLQKRIILNGTAYDIEF
EYAKHKISKRWPGLRQIALDLYKDEDMSEIMSESVCPSCKGFRLKPESLAVKVAGKTISE
IISMPISDAYEFFKNEENFSHLNEQEKRIAEPILKEIRERLFFLVDVGLGYLTLHRDART
ISGGESQRIRIASQIGSGLTGVMYVLDEPSIGLHERDTLKLINTLKNLRDKGNTVIVVEH
DRETILNADHIVDIGPGAGKFGGEVIFSGNTQELLKSDTETAKYIKREKDINYRKDRPQN
EWIEIKNVNIHNIKDLNVKIPLRNLVCVTGVSGSGKSSLILQTLLPTAREILNHAHKIQK
VKGVEITGLKQLDKVIYLDQSPIGRTPRSNPATYTGVFDDIRNLFAQTPEAQLRGYTPGR
FSFNVKGGRCEVCKGEGQIKIEMHFLPDVMVTCEACGGKRYNEQTLEIKYKGKSIADVLE
MSVDEAYEFFEKIPKIKQKLKTLKDVGLGYITLGQNATTLSGGEAQRIKLSKELSRRDTG
NTLYILDEPTTGLHFADIDRLVQVLQHLVDLGNSVIVIEHNLDFIKNADYIIDMGPEGGS
GGGKVIATGSVEEVAEKYTDVSYTARFLAQEIKSAK
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggataaaatcaaaatcatcggagcaagggaaaacaaccttaaaaatataaaccttgaa
ataccgaaaaacaaactgatagtgtttaccggactttccggaagcggtaaaagtacgctt
gcattcgatacgctgtatgctgaaggacagagaagatatattgaaagccttagttcatac
gccagacagtttttacaaaagacaggaaaacctgaagtggataaaatagacgggcttacc
ccggctattgcgattgatcagaaaaccacctccaaaaaccctcgctcaaccgtgggaacg
gttaccgaaatatacgattatttaagactcctgtacgcaagaatcggtatccagcactgc
cacctttgcggcaaacagattacccaaatgactcctcaggatattatcaatgaggttctt
aaactgcctgaaggcgcgaagattatcatttatgctccgattgtaaaagaaaaaaagggt
gaatttcacgatttaatcgaaaaactaagaaaagaaggaatcataagagcctacatcgac
ggcgtaatagtaaggcttgatgaggagattgaacttaaaaaaaccaaaaaacacaccatt
aaagccgtaatcgacagggttatcgtaaaagaagaaaacaaatcacgtatagcagaagcc
gtcgaaaaagctcttaataaaagtttcggagaggttgaaatagaaatattaaacgcaaaa
gatttggggcttgagagagattttatccattacagcgaacatcttgcgtgttttgactgt
aagataagttttgaagagcttgaacctgtcagtttttcgttcaactcaccaaaaggtgcc
tgtccgaaatgtgacggacttggagttacatacacacttgatatcgaaaaggttataaaa
gacaaacccctaaataaaggctcaataccgcttatatggggatttaacaaaaaatattac
caggagtttttcaaagcactctgccgcgagcttgatatagatatgaacaagagctttttc
gagcttgacgacctgcaaaaaagaatcatcctaaacggtacggcttatgacatagaattc
gaatacgcaaaacacaaaatttcaaaaagatggccgggactcagacaaatcgcactggat
ctttacaaagacgaagatatgagcgaaattatgagtgagagcgtatgtccttcgtgtaaa
ggattcagactcaaacccgaaagccttgccgtaaaagtggcgggtaaaacaatcagcgaa
ataatatcgatgcctataagcgatgcgtatgagtttttcaaaaacgaagaaaacttctca
cacctaaatgaacaggaaaaaagaatagcggagcctattttgaaagagatacgcgaaaga
ctatttttccttgtggacgtgggactcggatacctcacccttcacagggacgcgagaact
ataagcggtggtgagagccagagaatcagaatcgcctctcagatcggaagcgggctgaca
ggagttatgtacgtgcttgacgagccgagtataggtctgcatgaaagggatacgcttaaa
cttatcaacacacttaaaaacctgagagacaaaggcaacaccgtaatagtcgtagaacac
gacagggaaacgatcctcaacgcagatcatatcgtggatataggtcccggtgccgggaaa
ttcggaggagaggtaatattcagcggtaatacgcaagagcttctcaaaagcgacaccgaa
accgcaaaatacattaaacgtgaaaaagacataaactatagaaaagacagacctcaaaac
gaatggattgaaatcaaaaacgtaaatattcacaacataaaagatctaaacgtaaaaatc
ccgctaagaaacctcgtatgtgtaacgggagtcagcggtagcggtaaaagctcactaata
ctccaaaccctgcttccaacggcaagggagatactaaaccacgcacacaaaatacaaaaa
gtaaaaggcgtggaaattacgggactaaaacagctcgataaagtaatttatctcgatcag
agccctatcggaagaacaccacgctccaacccggcaacttacactggagtgtttgacgat
ataagaaacctattcgcccagactcctgaagcacagcttagaggctatacgccagggaga
ttcagctttaacgtaaaaggcggaagatgtgaggtgtgtaaaggtgaaggacagataaaa
atcgaaatgcacttcctgccggatgtaatggttacatgcgaagcgtgcggaggaaaaaga
tacaatgaacaaacgcttgagattaaatacaaaggcaaatcaattgcggacgtgcttgaa
atgagtgtggatgaagcgtatgagttttttgaaaaaataccgaaaataaaacagaaacta
aaaaccctaaaagacgtgggactcggatacattacactcggacaaaacgccacgactctc
agcggaggggaagcacagagaatcaaactatctaaagagcttagccgccgcgataccgga
aatacgctttatattctcgatgaacctacaacggggcttcattttgcggatatagacagg
ctcgttcaggtgcttcagcaccttgtggatctcggaaacagcgtaatagtcatcgagcac
aatcttgattttattaaaaacgcggattacataatcgatatgggccctgagggcggaagc
ggcggtggaaaggtgatagctacgggaagtgttgaagaagttgccgaaaaatacaccgat
gtaagctacaccgcaagatttctggcacaggaaattaaaagcgccaagtaa
DBGET
integrated database retrieval system
