Nautilia profundicola: NAMH_0496
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Entry
NAMH_0496 CDS
T00860
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nam
Nautilia profundicola
Pathway
nam03420
Nucleotide excision repair
nam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NAMH_0496
03430 Mismatch repair
NAMH_0496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nam03400
]
NAMH_0496
Enzymes [BR:
nam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NAMH_0496
DNA repair and recombination proteins [BR:
nam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NAMH_0496
MMR (mismatch excision repair)
Other MMR factors
NAMH_0496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
eIF3_p135
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ACM92878
UniProt:
B9L8F6
LinkDB
All DBs
Position
complement(435455..437452)
Genome browser
AA seq
665 aa
AA seq
DB search
MDFLNELNDAQKEAATHIDGALLILAGAGSGKTKTITTRLAYLLSLGIDPSNTLTLTFTN
KAASEMRERALRMIDNNAAHPPLLSTFHKFGLMFLKLYIHLINRKNTFVIIDSDDQKKIL
KSISTDLPMSFVSKEISKYKNSFLNADEVFSLAKDTTYKKLAHIYDKYQKYLLENNLVDF
DDLLLLTYTILNENDDLCREISDKYQYIMVDEYQDTNEIQLLLLKKLCRTHNNICVVGDD
DQSIYGFRGANHKNILNFEKDFDAKVIKLETNYRSTNQILKAANSLISFNKMRYDKKLKS
ALGDGKEIELLKSYNEMAEAEAIAKRIKNLIDRGVNPKEIAVLYRINALSRSIEDGLRTH
GITYKLVGGMRFYEREEIKDLISYLRVFVNPNDDYSFKRIINKPKRGIGKTTILKLEEAK
GNKSFLEFIKEDDLSFLSKKAAKTLKDLEKTIEFLSSLPIEELPEAIEKTLELSTSYKDE
DKRRNVEEFYGMMHERKDLNLREFLNELSLESDQDKITDEMINVMTIHASKGLEFEHLFV
IGMEEGFFPLNEADIEEERRLAYVAITRAKKELTLSYVESRYIRGQRSRVSKSRFLTEAG
LIKGERVNLKEAPSGGMFKVGGLVKHKVFGTGRILGINKAGNKTKLKIDFGHNIREILSD
FVEKA
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggactttttaaatgaattaaacgatgcacaaaaagaagcggcaacacatattgacggt
gcacttttaatattggcgggagcgggaagtggtaaaaccaaaacaattacaacaagactt
gcttatctattaagcctcggcattgatccttcaaacacactgacgctgactttcaccaat
aaagcggcaagcgaaatgcgtgaacgtgctcttagaatgatagacaacaatgcggcccat
ccaccgcttctcagcacttttcacaaattcggacttatgtttttaaaactttatatacat
ttaataaacagaaaaaacacatttgtaataatagacagtgacgaccagaaaaaaatttta
aaatcgatatcaaccgatctgccaatgtcttttgtaagcaaggaaataagtaaatacaaa
aactcttttttaaatgcagatgaagtattttcactcgcaaaagatactacatacaaaaaa
ttagcccacatatacgacaaataccaaaaatacctgcttgaaaacaatcttgttgatttt
gacgaccttctgcttttgacatatacaatattaaacgaaaacgatgatttatgcagagaa
atttcggacaaataccaatacattatggttgacgaatatcaggacaccaacgaaatacag
ctgcttctactgaaaaaactgtgccgtacacacaataatatctgtgttgtgggtgacgat
gaccagtctatttacggattcaggggcgcaaatcataaaaacattttaaattttgaaaaa
gatttcgatgccaaagttataaaactcgaaacaaactaccgctctaccaatcagatttta
aaagcggcaaattcgcttataagttttaataaaatgagatatgataaaaaattaaaatcg
gctcttggagacggcaaagaaattgaattactaaaaagctataatgaaatggccgaagct
gaagctattgccaaaagaatcaaaaatttaatagacagaggcgtaaaccctaaagaaata
gccgtgctttacagaatcaacgccctttcacgttcaatagaagacggtcttagaacacac
ggtattacctacaagcttgtaggaggtatgaggttctatgaaagagaagagataaaagat
ctaatcagttatttaagggtatttgtaaaccctaatgacgattattcattcaaacgaata
ataaacaaaccgaaaagaggaataggaaaaaccactattttaaaacttgaagaagccaaa
ggcaataaatctttccttgaatttataaaagaggatgatttatcgtttttaagcaaaaaa
gccgccaaaacactcaaagatcttgaaaaaacaatagagtttttaagctcgcttccgatt
gaagagctgccggaagcaattgaaaaaacactggagcttagtacaagctacaaagacgaa
gacaaaagaagaaacgtagaagagttctacggtatgatgcatgaaagaaaagatctgaat
ttaagggagtttttaaacgaactttcgcttgagagcgaccaggataaaattaccgatgaa
atgataaacgtaatgacaatccatgcaagcaaagggcttgaattcgaacatctttttgta
ataggtatggaagaagggtttttccctcttaacgaagccgacatcgaagaagaaagacgc
cttgcgtatgtcgccattacaagggcgaaaaaagaactcaccctctcatatgtcgaaagc
agatatataagaggacaaagaagcagggtttcaaaaagtagattcctgacagaagctgga
cttataaaaggcgagcgagtcaacctcaaagaagcgccaagcggaggaatgtttaaagtc
ggaggacttgtaaaacacaaagtattcggaacgggaagaatcctcggcattaacaaagcc
ggaaacaaaacaaaactcaaaatcgacttcggtcataacataagggaaattttaagcgat
tttgtggaaaaagcgtaa
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