Nautilia profundicola: NAMH_0521
Help
Entry
NAMH_0521 CDS
T00860
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
nam
Nautilia profundicola
Pathway
nam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NAMH_0521 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nam03021
]
NAMH_0521 (rho)
03019 Messenger RNA biogenesis [BR:
nam03019
]
NAMH_0521 (rho)
Transcription machinery [BR:
nam03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NAMH_0521 (rho)
Messenger RNA biogenesis [BR:
nam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NAMH_0521 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
ATPase_2
OB_RNB
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
ACM93734
UniProt:
B9L8I1
LinkDB
All DBs
Position
462337..463662
Genome browser
AA seq
441 aa
AA seq
DB search
MENENQTTANNGNSNKKQRTHIPVEGYTIEDLRSKPTEELIKIANELGVENPQEFKRQDL
MFEILKAQVAQGGYLLFTGILEVMPDGYGFLRSIGGNFENSLNDVYVSQTQIRRFALRTG
DIVTGQVRPPKDQEKYYALLKIEAINYLPPEEAKKRPLFDNLTPLYPQEKIKLEYEPTKL
TGRVLDLFAPIGKGQRGLIVAPPRSGKTVFLKEIAHGITHNHPEIELMVLLVDERPEEVT
DMQRSVKGEVYSSTFDKPAQNHVRVAELVIEKAKRMVEMGKDVVILLDSITRLARAYNTV
TPASGKVLSGGVDANALHKPKRFFGAARNIEEGGSLTIIATALIETGSKMDEVIFEEFKG
TGNMEAVLSRRIADRRIYPAIDLLKSGTRKEELLLTPEELAKVWAIRNIISEMDEIEALK
LMYSKMLKTKNNQEFLSIINE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacgaaaatcaaactaccgcaaataacggtaatagtaataaaaaacaaagaact
catattcctgtcgaagggtatacgattgaagatttgagaagcaaacctaccgaagagctt
attaaaattgcaaacgaacttggagttgagaatcctcaagaatttaagcgtcaggatttg
atgtttgaaattttaaaggctcaggtagcacagggaggatatctgctttttaccggaata
cttgaagtaatgccggacggatacggatttttaagaagtataggcggtaactttgaaaac
tccctaaacgacgtgtacgtatcacagactcaaatcagaagatttgcactaagaacaggg
gatatcgttaccggtcaggtaagacctcctaaagatcaggaaaagtattatgcgctttta
aaaatagaggcaatcaactatcttccacctgaagaagctaaaaaaagacctctttttgac
aaccttacacctctatatcctcaggaaaaaataaaacttgaatacgaaccgacaaaactt
acagggcgtgtacttgatcttttcgctcctatcggaaaaggacaaagaggacttatcgta
gcgcctccaagaagtggtaagacagtatttttaaaagaaatagcgcatggtattacacat
aatcatcctgaaatcgaactgatggtacttcttgtagatgaaagacctgaagaagtaacc
gatatgcaaagaagtgtaaaaggcgaagtttattcttccacattcgataaacccgcccaa
aaccatgtaagagttgccgagcttgtaatcgagaaagcaaaaagaatggtggagatgggt
aaagacgttgtgattttgcttgattcaatcacaaggcttgcaagagcatacaacaccgta
acaccggcaagtggtaaggtgctcagcggtggtgttgatgcaaacgcacttcacaaacct
aaaagattcttcggtgcggcgagaaatatagaagagggcggaagccttacgatcatagca
acagcacttattgaaacaggttcaaaaatggatgaggttatttttgaagaattcaaaggt
acgggtaatatggaagcggtactaagcagaagaattgcggacagaagaatttatcctgcg
attgacctgcttaaatcgggaacaagaaaagaagagctgcttttaactcctgaagaactt
gcaaaagtttgggctattagaaatataatttcagaaatggatgaaattgaggctttaaaa
cttatgtattctaaaatgctcaaaaccaaaaacaatcaggagtttttaagtattatcaat
gaatag
DBGET
integrated database retrieval system
