Nautilia profundicola: NAMH_1117
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Entry
NAMH_1117 CDS
T00860
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
nam
Nautilia profundicola
Brite
KEGG Orthology (KO) [BR:
nam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nam03016
]
NAMH_1117 (truD)
Enzymes [BR:
nam01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
NAMH_1117 (truD)
Transfer RNA biogenesis [BR:
nam03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NAMH_1117 (truD)
Prokaryotic type
NAMH_1117 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ACM92695
UniProt:
B9LA56
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All DBs
Position
complement(1035034..1036110)
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AA seq
358 aa
AA seq
DB search
MIYSHAPINFVFNKNSENFFVEEIPLYSFDHTGEWLMLKVRKKDMTTSDVVNMFSKLGIQ
KRDIGYAGLKDKDGLTVQWMSVPRKFRDRINKFEHSKVRIVEQDLHRNKLKIGHLKGNRF
FVRLKKVLPVDAKKIERVLIDIKKFGIPNFFGYQRFGKFGDNFEQAKEFIFGDKHIKDKR
LQKLLISAYQSKLFNDWLMERIKLSNIFDMKDDELKFLGYEKELIKFVKKQKHPFKLLPG
DVMCHYPFGKNFYLENLEDTERFYKKDIVPTGLLPGKKAIRAKDFARTIEEKYDDLIPAN
GDRRSAWIFPEITEKKYIKEKAWYEFSFILPKGSYATVLIEILQNGITDNLITYKGDK
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgatatattcacacgctcctataaacttcgtttttaataaaaattcggaaaactttttt
gttgaagaaatccctctttattcgtttgaccataccggtgaatggttgatgcttaaggtt
agaaaaaaagacatgacaacttctgatgttgttaacatgttttcaaaactcggtatccaa
aaaagggatattggttatgccggacttaaagataaagacggacttactgttcaatggatg
agtgttccgagaaaattcagagatagaattaataaattcgaacattcaaaagtaagaata
gtagaacaagatttacacaggaataaattgaaaatcggacatttaaaaggaaataggttt
tttgtaaggcttaaaaaagttctacctgtagatgctaaaaaaattgaaagagttcttatt
gatattaagaagttcggaattccaaattttttcggatatcagaggtttggaaagttcggt
gataatttcgaacaggcaaaagagtttatattcggagataaacacataaaagacaaaaga
cttcaaaagctcttaattagcgcatatcagtcaaagctttttaacgactggcttatggag
aggattaaactcagcaatatttttgatatgaaagatgatgaacttaaatttttaggatat
gaaaaagaactgatcaaatttgtaaaaaaacaaaaacatccttttaaacttttacccggt
gatgtgatgtgtcattatcctttcggtaaaaatttttatcttgagaatttggaagatact
gaaaggttttataaaaaggatattgttcctaccggtcttcttccaggcaaaaaagctata
agggctaaagattttgcaagaacaatcgaagaaaaatacgatgatttaatccctgcaaac
ggtgacagaagaagcgcatggatttttcctgaaattactgaaaaaaaatatattaaagaa
aaagcttggtatgaattttcttttatattgccaaaaggtagttacgctactgttttaata
gaaatattacaaaacggtataactgataatttaataacttataaaggagataaatga
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