Nautilia profundicola: NAMH_1312
Help
Entry
NAMH_1312 CDS
T00860
Symbol
ybbB
Name
(GenBank) tRNA 2-selenouridine synthase
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
nam
Nautilia profundicola
Brite
KEGG Orthology (KO) [BR:
nam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nam03016
]
NAMH_1312 (ybbB)
Enzymes [BR:
nam01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
NAMH_1312 (ybbB)
Transfer RNA biogenesis [BR:
nam03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
NAMH_1312 (ybbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhodanese
RsgA_GTPase
AAA_22
DSPc
NACHT
ABC_tran
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
ACM93338
UniProt:
B9L5R8
LinkDB
All DBs
Position
complement(1210913..1211914)
Genome browser
AA seq
333 aa
AA seq
DB search
MQIITLEEFLKQKFDYVLDARSPREFEESHIPGSENFYVLNNEQHAYIGNLYTNHSKFHA
KKEAVSFMLENISAQLKSFDAKPGSRILVYCARGGKRSTALYTILSQLDYRVYKLEGGYK
AYRKWVVDYLQNFPHKKFAVLRGNSGCGKSELLEHLHPSLDLEKLANHFGSNFGYKGAQP
SQKQFENEVADILIKTDPEKTIYIEAESPKIGSLYIPKLLHKRMQEGIQIEVTADLNDRV
KRIINYYGDIDDTGFINTLDKIKPFISTTIYEELKSYFLNGDIQKVAEMLLTEYYDKKYR
KKPADFVVKNDDLKKCAREIESFVASVVKPSDT
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagataataactcttgaggaatttttaaaacaaaaatttgattatgtacttgatgcg
agaagtccgagggagtttgaagagtcgcatatcccaggaagtgagaacttttatgtttta
aacaacgaacagcacgcttatatcggaaatctgtatacaaaccattcaaaatttcatgca
aaaaaagaagcagtaagttttatgcttgagaatatatccgcccagcttaaaagctttgac
gccaaaccaggaagcagaattcttgtgtactgtgcgaggggaggtaaaaggtctacggct
ttatatacgattctttcacaattggattatagggtttataaactcgaaggcgggtataag
gcttacagaaagtgggtggtcgattatcttcaaaactttccacataaaaagtttgccgtt
ttaagaggaaacagcggatgtgggaaaagtgaacttttagaacatctgcacccgtcttta
gatcttgaaaaacttgcaaaccatttcggcagtaatttcggatataaaggcgcacagcca
agccaaaagcagtttgaaaacgaagtagcggacattttaattaaaaccgacccggaaaaa
accatatatatagaagcggaaagcccaaaaataggatcgttgtatatcccgaaacttctt
cacaaaagaatgcaagaaggcatacagatagaagtaactgcggatcttaacgacagggtc
aaaagaataataaactattacggggatattgacgatacagggtttataaacacgcttgat
aaaataaaaccttttatttcaacgacaatatatgaagaacttaaaagttactttttaaat
ggtgatattcaaaaagtagccgaaatgctgcttacggaatattatgataaaaaatacaga
aaaaaaccagccgattttgtagttaaaaacgacgatttgaaaaaatgcgcccgtgaaata
gaatcatttgttgcatctgttgttaagccatctgatacttaa
DBGET
integrated database retrieval system
