Nautilia profundicola: NAMH_1555
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Entry
NAMH_1555 CDS
T00860
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
nam
Nautilia profundicola
Pathway
nam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NAMH_1555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nam03019
]
NAMH_1555
03009 Ribosome biogenesis [BR:
nam03009
]
NAMH_1555
Enzymes [BR:
nam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NAMH_1555
Messenger RNA biogenesis [BR:
nam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NAMH_1555
Ribosome biogenesis [BR:
nam03009
]
Prokaryotic type
rRNA helicases
NAMH_1555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Helicase_RecD
SecA_DEAD
AAA_30
Cas3-like_C_2
UvrD-helicase
2H-SAK
Motif
Other DBs
NCBI-ProteinID:
ACM92187
UniProt:
B9L6F6
LinkDB
All DBs
Position
complement(1456073..1457476)
Genome browser
AA seq
467 aa
AA seq
DB search
MTFNDFNLKKEILKRLEEIGFEKPSPIQEKAIPVVLQGKDIVAQAQTGTGKTAAFGLPIL
NMLEKGQKALIITPTRELAIQVSEEIFRFGKHLGIHTATVYGGSSYSRQINHIKNSEVIV
ATPGRLIDLLSSGKIDIAPEYVVLDEADEMLDMGFLDDIKEIFKYVPSNRQTLLFSATMP
KPILSLAKTILKDPEFIQITKKEVTNENIKEYFYVIDEHERNDALIRLIDYKQPNKAIVF
CRTKKDVDTVADFLSGVGFDAKGLHGDMDQRKREEVIKGFKGNRIEILVATDVAARGLDV
NDVTHVFNYHLPLDPESYVHRIGRTGRAGKEGMAISLVTPHEFRALSKIQKISKIELKEV
PTLQDVKNTEIQKIMEKISSIEPNTKSIEIVEVLQNDFDLFTIATKFASMLFEKDADGKE
RIGKSLKEAKRLLERSANSKGGNDRDRRRGRRGNFRGGRNSGRGRRR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgacatttaatgattttaatttaaaaaaagaaatactaaaaagattggaagaaatcgga
tttgaaaaaccgtctccgattcaggaaaaagcgatccctgtagttcttcagggtaaagat
attgtagctcaggctcaaacaggtactggtaaaacagctgcatttggactaccgattctt
aatatgcttgaaaaagggcaaaaagctcttattattactccgacaagagaacttgctatt
caggtaagtgaagaaattttcagattcggaaaacacctcggaatccatactgctacagtt
tatggaggaagcagctattcaagacagattaaccacatcaaaaattctgaagtaatcgta
gcgactcccggaagactaatagatcttttaagcagcggtaaaatcgatattgcacctgag
tatgtggtgcttgacgaagctgatgaaatgcttgatatgggatttttggatgatattaaa
gagattttcaaatacgtaccgagcaacagacaaacgcttcttttcagtgcgacaatgcca
aaaccgattttaagtttggcaaaaacgattcttaaagacccagaatttattcagattaca
aaaaaagaagtaaccaacgaaaatatcaaagaatacttttacgtaatcgacgaacatgaa
agaaacgacgctttaataagactaattgattataaacagcctaataaagcgatagtgttt
tgtagaacaaaaaaagatgtagatacggtggctgactttttaagcggtgtaggttttgat
gcaaaaggtcttcacggtgatatggaccaaagaaaaagagaagaagttatcaaaggattt
aaaggtaacagaatagaaatacttgtagcgactgatgtagcggcaagaggtcttgacgta
aatgatgttacacatgtatttaactatcacttaccacttgatcctgagagctatgttcac
agaatcggaagaacaggaagagccggtaaagaaggtatggctatttcgcttgtaactcct
catgaattcagagctcttagtaaaattcagaaaatttctaaaattgaactaaaagaagta
ccgacacttcaagatgtgaaaaatacagaaatccaaaaaattatggaaaaaataagttca
attgaacctaacacaaaatctattgaaattgtagaagtgttacaaaacgattttgaccta
tttacaatagctacaaaatttgcaagtatgctttttgaaaaagatgcagacggtaaagag
agaatcggaaaaagtttaaaagaagcaaaaagacttcttgaaagaagcgctaactcaaaa
ggcggaaacgatagagacagaagaagaggtagaagaggaaatttcagaggcggcagaaac
tctggaagaggcagaagaagataa
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