Nautilia profundicola: NAMH_1798
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Entry
NAMH_1798 CDS
T00860
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
nam
Nautilia profundicola
Pathway
nam00300
Lysine biosynthesis
nam00470
D-Amino acid metabolism
nam01100
Metabolic pathways
nam01110
Biosynthesis of secondary metabolites
nam01120
Microbial metabolism in diverse environments
nam01230
Biosynthesis of amino acids
Module
nam_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nam00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NAMH_1798 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NAMH_1798 (dapF)
Enzymes [BR:
nam01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NAMH_1798 (dapF)
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Motif
Pfam:
DAP_epimerase
DUF3892
Motif
Other DBs
NCBI-ProteinID:
ACM93596
UniProt:
B9L726
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Position
complement(1667949..1668677)
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AA seq
242 aa
AA seq
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MVVSKYSASGNDFVIFHAFLKKDRSEIAKILCDRQNGVGADGLIVILPHEQYDFEWQFYN
ADGSEAEMCGNGSRAAAHYAYVNELAPKKMQFLTIAGVIEAEVDGDIVESQLTEHKIIKE
VGEWKLFDTGVPHLVKIDDINSFNIEEARKLRYEHNANVNVAEVKDGNLYVRTYERGVED
ETLACGTGMCASFLFAREQGLVGNEVTVYPKSGEELHIKLKNNRLYFKGKVKNTFITTFN
VT
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atggtagtgagcaaatatagtgcgagtggaaatgattttgttatatttcacgcatttttg
aaaaaagacaggagcgaaatagctaagattttatgtgacagacaaaacggagtaggtgct
gacggacttatcgttatacttcctcatgaacaatatgattttgaatggcagttttacaat
gctgacggaagtgaagcagaaatgtgtggtaacgggagcagggcggccgctcattatgca
tatgttaacgaattggctccaaaaaaaatgcaatttttgacaattgcaggagttattgaa
gctgaggttgacggtgatattgttgagtcgcagttaaccgaacataaaataatcaaagaa
gtaggggaatggaaactgtttgataccggagttccacatttagtgaaaattgatgatatt
aatagttttaatatcgaagaagccagaaaactaagatatgaacataatgcaaacgtaaac
gttgccgaagtaaaagacggtaatttatacgtacgtacatatgaaagaggtgttgaggat
gagacacttgcctgcggtaccggaatgtgtgcgagttttctttttgcgcgtgaacaggga
ttagtgggtaatgaagtaacagtttaccctaaaagcggcgaagaacttcatataaaactt
aaaaacaacagactttatttcaaaggtaaagtaaaaaacacttttatcactacatttaac
gttacataa
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