Nosocomiicoccus ampullae: KPF49_02920
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Entry
KPF49_02920 CDS
T07372
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
namp
Nosocomiicoccus ampullae
Brite
KEGG Orthology (KO) [BR:
namp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
namp03032
]
KPF49_02920 (topA)
03400 DNA repair and recombination proteins [BR:
namp03400
]
KPF49_02920 (topA)
Enzymes [BR:
namp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KPF49_02920 (topA)
DNA replication proteins [BR:
namp03032
]
Prokaryotic type
DNA Topoisomerases
KPF49_02920 (topA)
DNA repair and recombination proteins [BR:
namp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KPF49_02920 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QYA47408
LinkDB
All DBs
Position
569201..571267
Genome browser
AA seq
688 aa
AA seq
DB search
MADNLVIVESPAKAKTIGKYLGRRYKVVASMGHLRDLPRSQIGIDVENNYQPKYITIRGK
GPLLQDLKKEAKKAKKIFLASDPDREGEAIAWHLAHALGDDKEYYRVVFNEITKDAVKNS
FKEPREMDQQLVDAQQARRILDRLVGYNISPVLWKKVKKGLSAGRVQSVALKLIIDRENE
IRNFKPEEYWSIEGHFKYKRSKFTGKFHKLEKDNKKTELPNKESVDKVLSQLNGDDFNVD
TVEKKEKLRYPAYPFTTSTLQQESARKLNFRARKTMMLAQQLYEGIDIKGEGTVGLITYM
RTDSTRVSNEAKSEAYSYIEDKFGKEFLGKRKDKKSEGQDAHEAVRPTSTLRTPQDMKPY
LSRDQYRLYKLVWDRFVASLMAPAVLDTVRVDLNNNGVIFRSNGSTIKFKGFLQVYEEGT
DEKQEKNENIIPEIAKDDTVKSEKIEPNQHFTQPPPRYTEARLVKTLEESGIGRPSTYAP
TIETIQKRNYVKLDQRRFVPTELGEIVSEQVSDYFPDIIDVDFTKDMEKQLDEIAEGNKD
WVKVIDEFYTGFRPQVEKAEEEMEEIEIKDEPAGIDCEKCGSPMVYKMGRYGKFMACSNF
PNCRNTKPIVKKLGVTCPKCEKGEVIERKSKKGRIFYGCDQYPDCDFVSWDKPIGRNCPK
CDHYLVEKRKGKTVKVKCSNCDYEEDAN
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
gtggcagataatttagtcattgtagagtccccagcaaaagcaaagacgatcggtaaatat
ttaggtcgtcgctataaagttgttgcatcaatgggacaccttagagatttgccccgtagt
caaataggtattgatgtagaaaataactatcaaccaaaatatattacgattagaggtaaa
ggacctttacttcaagaccttaaaaaagaagcgaaaaaagcaaagaaaatatttttagca
tccgacccggaccgtgaaggtgaagcaattgcttggcatttagcgcatgcccttggtgac
gataaggaatattaccgcgtcgtatttaatgaaattacaaaagacgctgtaaaaaacagt
tttaaagaaccaagagaaatggatcagcaacttgtcgacgcacaacaagcacgtcgtata
ttagaccgacttgttggttataatatttcaccagtattatggaagaaagttaaaaaagga
ttatctgcaggtcgcgttcaatctgtagcattaaagcttattattgaccgtgaaaatgaa
attcgtaactttaaaccagaagaatattggtcaattgaaggtcattttaaatataaaaga
tctaaatttacaggtaaatttcataaactagaaaaagataataaaaaaacagaattacca
aacaaagaatctgtagacaaagtgttaagtcagttaaacggtgacgattttaatgtagat
accgtcgagaaaaaagaaaaactacgttatccagcgtatccattcacgacgtcaacactt
caacaagaatccgcgcgtaagttaaatttccgtgcacgtaagacgatgatgctcgcacag
caactttacgaaggtattgacattaaaggtgaaggtacagtcggtttaattacttatatg
agaactgactcgacacgcgtatcaaatgaagcaaaatctgaggcgtatagttatattgaa
gacaaatttggtaaagagtttttaggcaaacgtaaagataaaaaatctgaaggacaagat
gcacacgaagcagttcgtccaacttcaacgttacgtacaccacaagatatgaaaccatat
ttatctagagatcaatatagactgtataagcttgtttgggaccgttttgttgcaagtctt
atggccccagctgtgttagatactgttcgcgtagatttaaataacaatggtgttattttt
agaagtaacggttcgacaattaaatttaaaggtttcttacaagtgtatgaagaaggcact
gatgagaaacaagagaaaaatgaaaacatcatcccagaaattgcaaaagatgacactgta
aaatctgagaaaatcgaaccaaatcagcattttactcaaccaccaccacgttacactgaa
gcaagacttgttaaaacgttagaagagtctggtatcggtcgtccatcaacttacgcacca
acgattgagacgattcaaaagcgtaactatgtgaaactcgatcagagaagattcgttcca
actgaacttggtgaaatcgtatctgaacaagtatcagattacttcccagatattatcgat
gtcgattttacaaaagatatggaaaagcaacttgatgaaattgctgaaggtaataaagac
tgggtaaaagtaatcgatgaattttacactggctttagaccacaagttgaaaaagctgaa
gaagagatggaagagattgaaattaaagatgaacccgcaggtatcgactgtgaaaaatgt
ggttcaccaatggtttataaaatgggtcgatatggtaaatttatggcgtgttcgaacttc
ccgaactgtcgtaacacaaaaccaatcgttaaaaaactcggtgtgacttgtccgaaatgt
gaaaaaggagaagtcatcgaacgtaaatctaaaaagggccgtatcttctatggttgtgac
caatacccagactgtgactttgtatcttgggacaaaccaatcggtagaaattgcccgaaa
tgtgatcattacttagttgagaaacgaaaaggtaaaacagttaaagtgaaatgttcgaac
tgtgattatgaagaagatgcaaactaa
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