Nosocomiicoccus ampullae: KPF49_03250
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Entry
KPF49_03250 CDS
T07372
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
namp
Nosocomiicoccus ampullae
Brite
KEGG Orthology (KO) [BR:
namp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
namp03400
]
KPF49_03250
DNA repair and recombination proteins [BR:
namp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KPF49_03250
Archaeal homologous recombinant proteins
KPF49_03250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
Exonuc_VII_L
DUF4407
Motif
Other DBs
NCBI-ProteinID:
QYA47471
LinkDB
All DBs
Position
641671..644661
Genome browser
AA seq
996 aa
AA seq
DB search
MKPIKLHMEFIGPYKNETIDFRDLNNSLFLISGRTGSGKSMIFDAITYALFATASTESRG
GESLRSQFASDDELSKVHLDFSHRGKEYRIERVLTYKKRKNKTPTTGQAAIYNEFGELLA
SGLKEVSVFVEDLLQMTARQFRQIALLPQGEFKKLLTANSGEKEEILKTLFGTERFNDVY
KSIYKEFKTKENNLDLLSKEIETKFSVVTTEPIFEFNTSLKEFEASIEEKREDLSKKRDG
LKPVVSSIEKLSEEIDLDRKHNEKVTEYKNTETSLKDLVTKQYKIKETEKTLHVVEELSK
IKEIFNLEKSISKKLSESVQKEDELSKSLEYDENELKTVTYTIDNLKNKENLIESKEKKL
STLNKHSTERYNNLDSSIQHAENEIAELKSHTEKLTNDISLKTKELEETDVSYDALRVLS
ENRHSLQLNITELKRDIEDAEREEKKVKELELHLKEHDKLMNELIIMEKEKDSILKAFTE
MSLETSDSIHHLLSHLEVGKPCPVCQTIVTEYPEHKEMMDESTKETLTDLMNRIESLKKE
IDTLEIRIEAAKGNISDERKDMNSLNEALSKLNVEFKNIEEKYTYQNDNLKKKEALDREV
NELKQLLTQKREALTYKDKSLSDLKNMKDEFVKETGLNDFNSLKKEIDVLSRSINNHHEM
LKESETKRQDLLVKITKLNTEVSSLKENIESFEANLNEYTPKIESFLEKYDSVDRSNIED
YFKIDYNSLKNEVDTFYSNVHELEFTLNKLKETLDSFDVIDVSKKEERLVELETKKNELT
QLITETEYQLNKDLALKEELVDLIKKYNDAREIVRKLSILEKIINGNSEGKRSTHPTLSR
FVLIHYLELILVYANKRLTEMTNGRYELRRKDTYNASEALIIDVFDHFNNETRNIATLSG
GETFQASLALSLSLSEVIQHEAGSINMDMLLIDEGFGTLDEETLNTAINTLVDIQTRGKM
VGIISHVEELKTRLQNIIYVETENERSTTKIVTYLS
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaattaaattacatatggaatttatcgggccatataaaaatgaaacaatcgat
tttagagatctaaacaattcattatttttaatatctggacgtactggttctggtaaatcg
atgatctttgatgcaattacgtacgcgctatttgctactgcttcaactgaaagtagaggc
ggagagtcactaagaagtcagtttgctagtgacgatgagttatcaaaagtccatttagat
ttttcacatcgcggaaaagaatatcgaattgaacgcgtattaacatataaaaaacgtaaa
aataagaccccaacgacaggacaagcggcaatttataatgagttcggagagttacttgca
tctggtttaaaagaagtatctgtctttgttgaagacttactacaaatgaccgcacgtcag
tttagacaaattgcacttttaccacaaggtgaatttaaaaaactccttacggcaaatagt
ggagaaaaagaagaaattttaaaaacgttatttggtactgagcgatttaacgatgtatat
aaaagtatttataaggagtttaaaactaaagaaaacaatctagacttactgagtaaagaa
attgaaacaaaattttcagtagtgacgactgaaccgatcttcgaatttaatacgtcatta
aaagagtttgaagcttcaattgaagaaaaaagagaagatttaagcaaaaaacgtgatgga
ctaaaaccggtagtttcatcgatagaaaaattgtctgaagagatcgatttagaccgtaaa
cataatgaaaaagtgactgaatataaaaatacagaaacatcgttaaaagacttagtcact
aaacaatataaaataaaagaaacagaaaaaacattacatgtcgttgaagagctatctaaa
attaaggagatatttaacttagaaaaaagcatttcaaaaaaactttcagaatcagttcaa
aaagaagatgaattatctaaaagtttagagtatgacgaaaatgaactaaaaacagtcacg
tatacgatagacaatttaaaaaacaaagaaaacttaatagaaagtaaagagaaaaaacta
tctacgttaaataaacactctaccgagcgctataataacttagattcatcgattcagcat
gctgaaaatgagattgcagagttaaaaagccatactgaaaagttaactaacgatatttct
ttaaaaactaaagaattagaagaaactgacgtcagttatgacgcactcagagtgttaagc
gaaaataggcactcacttcagttaaacatcacggaattaaaaagagatattgaagatgct
gaacgtgaagagaagaaagtaaaggaacttgaactccacttaaaagagcatgataagtta
atgaatgagttaataattatggagaaagaaaaggatagtattcttaaagcatttactgaa
atgtctttagaaacaagtgattcaattcatcatttactttctcatttagaagtaggtaaa
ccgtgtccagtatgccaaacgattgttacagaatatcctgagcataaagaaatgatggac
gagtctacaaaagaaaccttaactgatttaatgaaccgtatagaatcattaaaaaaagag
atagatacgttagagattagaatagaagcggcaaaaggtaatattagtgatgaaagaaaa
gatatgaatagtttaaatgaagcgttgtctaaactaaatgtagaatttaaaaacattgaa
gaaaaatatacgtatcaaaacgataatctaaagaaaaaagaagcattagatcgtgaagtg
aatgaattaaagcagttactgacacaaaaaagagaggcacttacttataaagataagtct
ttaagtgacttaaaaaatatgaaagatgaatttgtaaaagagactggactaaatgacttt
aatagtttaaaaaaagaaatcgatgtgttgtcacgttcaattaataatcatcacgagatg
ttaaaagaatctgagacaaaacgacaagatctattagttaaaatcacgaagttaaataca
gaagtttcatctttaaaagaaaatattgaatcgttcgaagctaacttaaatgaatataca
cctaaaatcgaatcgtttttagaaaaatacgattcagtagatcgatcaaatatagaagac
tattttaaaatcgactataattctcttaaaaatgaagtcgatacattctatagtaatgtg
catgaattagagtttacgttaaataaactgaaagaaactctcgatagttttgacgttatt
gacgtctctaaaaaagaagaacgtcttgtagaacttgaaacaaagaagaatgaattaaca
caattgattactgaaacggagtatcaattaaataaggatttagcgcttaaagaagaattg
gtcgatttaattaaaaaatacaacgatgcgcgcgaaatagtacgtaaactaagtatttta
gagaagattattaatggtaacagtgaaggtaaacgttcgacgcatccgacattatctaga
tttgttttaattcactatttagagttaattttagtatacgcaaataagagactcactgaa
atgacaaatggacgttatgaattaagacgtaaagatacgtataatgcaagtgaagcgctg
attatcgacgttttcgatcactttaacaatgaaacgagaaatatcgcgacgttatctggt
ggagaaacgttccaagcaagtttagcactgagtttatcactctctgaagtcattcaacat
gaagcgggtagtattaatatggatatgcttttaattgacgagggatttgggacgttagat
gaggaaacactcaatacagccattaatacgttagttgatattcaaacgagaggtaaaatg
gttggtattatttctcacgttgaagaattaaaaacgagacttcaaaatattatttatgtt
gaaacagaaaatgaaagaagtacgacaaaaattgtaacgtatttatcataa
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