Nosocomiicoccus ampullae: KPF49_04170
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Entry
KPF49_04170 CDS
T07372
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
namp
Nosocomiicoccus ampullae
Brite
KEGG Orthology (KO) [BR:
namp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
namp03032
]
KPF49_04170
03036 Chromosome and associated proteins [BR:
namp03036
]
KPF49_04170
03400 DNA repair and recombination proteins [BR:
namp03400
]
KPF49_04170
DNA replication proteins [BR:
namp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KPF49_04170
Chromosome and associated proteins [BR:
namp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KPF49_04170
DNA repair and recombination proteins [BR:
namp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KPF49_04170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Glycos_trans_3N
Rpf1_C
Motif
Other DBs
NCBI-ProteinID:
QYA46210
LinkDB
All DBs
Position
810387..810659
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTDLINAVSDKADLTKKDASAAVDAVFEAIQGSLTEGEKVQLIGFGTFEVRERAARKG
RNPQTGEEIEIAASKVPAFKAGKALKDAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaactgatttaattaatgcagttagtgacaaagcagatcttactaaaaaagat
gcaagtgctgcagtagatgcagtatttgaagctattcaagggtcacttacagaaggtgaa
aaagttcaattaattggattcggaacttttgaagtacgtgaacgtgctgctcgtaaaggt
cgtaacccacaaacaggtgaagaaatcgaaattgcagcatctaaagttccagctttcaaa
gcaggtaaagctttaaaagacgcagtaaaataa
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