Nosocomiicoccus ampullae: KPF49_04825
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Entry
KPF49_04825 CDS
T07372
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
namp
Nosocomiicoccus ampullae
Pathway
namp03030
DNA replication
namp03410
Base excision repair
namp03420
Nucleotide excision repair
namp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
namp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KPF49_04825 (polA)
03410 Base excision repair
KPF49_04825 (polA)
03420 Nucleotide excision repair
KPF49_04825 (polA)
03440 Homologous recombination
KPF49_04825 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
namp03032
]
KPF49_04825 (polA)
03400 DNA repair and recombination proteins [BR:
namp03400
]
KPF49_04825 (polA)
Enzymes [BR:
namp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KPF49_04825 (polA)
DNA replication proteins [BR:
namp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KPF49_04825 (polA)
DNA repair and recombination proteins [BR:
namp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KPF49_04825 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KPF49_04825 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DUF3913
HHH
Motif
Other DBs
NCBI-ProteinID:
QYA46328
LinkDB
All DBs
Position
complement(942573..945170)
Genome browser
AA seq
865 aa
AA seq
DB search
MDKLILIDGNSLAFRAFYGLPLLSNQSGLHTNAIFGFQKILDKIIREEDPTHFLIAFDAG
KKTFRHEKYGEYKGGRQKTPPELGEQFAPIRKLIDAYGIKRYEVENYEADDIIGSLSKLA
DENGMETIIITGDRDLTQLASDHVTIYFTKKGVTQIDKYTPEFIEEEYGLRPEQIIDMKG
LWGDTSDNIPGVPGIGEKTAIKLLKKYDSVEGVYENIEELKGKQRENLENFKDDALMSKE
LATIYRDMTFDFNLDDLKLPPEDLDAKIKVFKEFEFNSLLENLNEAPVNDATTFETKRVG
SLSELGKNVSLYFESEHANYLLNKPAVLAVTDGENSFVTNIEDIDTESLKEFLTTRDTVN
TYDLKRQIAFLNQLDVTFTNFTGDIMLGSFLLDPGKKIVDVSTTVETFNIQIDSDESHYG
KGRNKKNPTIEETKDFTETKTLAIHHALKPLEKKLKDDEMYDLFKELEIPLSKVLSAMEI
KGITVDLDTLKEMETELEERLNHLKSEIYKIAGEEFNINSPKQLGVVLFEHLELPVIKKT
KTGYSTAADVLETLRPKHKIIEYILEYREIQKLQSTYVVGLQGQIHEDGRIHTRFNQTLA
QTGRLSSVEPNLQNIPIRLEEGRKIRKAFVPKSEDNVLLSLDYSQIELRVLASISKDEKM
IQAFNEGKDIHTITAANVYNVEPSEVTSTMRSNAKAVNFGIVYGISDYGLSQQLGITRKE
AKEFIDTYLDTFVNVKEYMKYIVQDAKRDGYVSTLLGRRRYVPDINSRNFNARSFSERIA
MNSPIQGTAADIIKLAMVNYFESEKKEKFDAELLLQIHDELVFDIPKIEVEDFIEVIKEI
MEHALEIEVPLKVEYEYGPNWYTME
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggataagttaattttaatagatggtaatagtttagcgttccgtgcattttatggacta
ccacttttaagtaaccaaagtggactgcatacgaatgctatttttggatttcaaaaaata
ttagataaaattattcgtgaagaagatcccacacactttttaattgcatttgatgcaggt
aaaaagacatttagacacgaaaaatacggagagtataaaggtgggcgtcaaaagacaccg
ccagaattaggtgaacagtttgcgccgattcgtaaattgattgatgcgtatggtattaaa
cgatatgaagtagagaactacgaagcggatgatattatcggttcgttgtctaaattagca
gatgaaaacggtatggagacaatcattattactggcgaccgtgacttgactcaactcgca
agtgatcacgtgacgatttactttacgaaaaaaggagtcactcaaatcgataaatataca
ccagagtttattgaagaagagtatggccttcgcccagaacaaatcattgatatgaaagga
ttatggggggatacgtcagataatattcctggtgtcccaggtatcggtgaaaagactgcg
attaaattacttaaaaaatatgattcagtcgaaggtgtctatgaaaatattgaagagtta
aaagggaaacaacgtgagaatttagagaactttaaagatgatgcgttaatgtctaaagaa
cttgcaacaatttatagagacatgacgtttgactttaatttagatgatttaaaactacca
cctgaagatttagatgccaaaattaaagtatttaaagaatttgaatttaactcgttactt
gaaaatttaaatgaagcaccagttaacgatgcgacgacttttgaaacaaagagagtcggt
agtttatcagaactcggtaaaaacgtctcactatattttgaaagtgaacatgcaaactac
ttattaaataagccagcagtactcgcagtgactgacggagaaaatagctttgtgacaaat
atcgaagatatagacaccgagtcacttaaagagtttttaacaactagagatacagtcaat
acgtatgatttaaaacgacaaatagcatttttaaatcaattagacgttacttttactaat
tttactggtgatattatgcttgggtcatttttacttgatccaggtaaaaaaatcgtagac
gtatcgacgacagtcgaaacttttaatattcaaattgatagcgacgaatcacattatggt
aaaggtcgcaataagaaaaatcctacaattgaagaaacgaaagattttactgaaacaaaa
acactcgcgattcatcacgcgttaaaaccactcgaaaagaaacttaaagacgatgagatg
tacgatttattcaaagaattagaaattcctttatctaaagtgttatcggctatggagatt
aaagggattactgttgatttagatacgttaaaagaaatggaaacagaacttgaagaacgt
ttaaaccatttaaaaagtgaaatttacaaaattgctggagaagagtttaatataaactca
ccgaaacaactcggagttgtattattcgaacatctagaattaccagtaattaagaaaaca
aaaacaggatactctacagcggcagatgtacttgaaacacttcgtcctaagcataaaatt
attgaatatattttagagtatcgtgaaattcaaaaactacaatcgacatacgttgtcggt
ctacaaggacaaattcacgaagatggtcgaattcatacgagatttaaccaaacacttgct
caaactggacgtctttcaagtgtcgaaccgaacctacaaaatatcccaattcgtttagaa
gaaggacgtaaaattagaaaagcgttcgttccaaaaagtgaagataacgttcttttatca
ctcgactattcgcaaattgagttaagagtactcgcgtcaatttctaaagatgaaaaaatg
attcaagcatttaatgaaggtaaagatattcacacaattacagcagccaacgtttataat
gttgaaccaagtgaagtgacgagtacgatgcgttcgaatgcaaaagcagttaacttcggt
attgtttacggcatttctgattacggattatctcaacaacttggaattacacgtaaagaa
gccaaagaatttatcgatacgtatctcgatacgtttgttaacgttaaagagtatatgaaa
tatatcgttcaagatgcaaagcgtgacggttacgtgtcgacgttactcggtcgaagacgt
tacgttccggacattaattcacgtaactttaacgcgagaagcttttcagaacgtatcgct
atgaattcaccaattcaaggaacagctgcagatattattaaacttgcgatggttaactac
tttgaaagtgagaaaaaagaaaaattcgacgcagagttattgttacaaattcacgacgaa
ctagtctttgatattccaaaaatagaggttgaagactttatagaagtcattaaagaaatt
atggaacatgcattagaaattgaagttccgttaaaggttgagtatgaatacggtccaaat
tggtacacaatggagtag
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