Natrarchaeobaculum sulfurireducens AArc1: AArc1_1602
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Entry
AArc1_1602 CDS
T05614
Name
(GenBank) RNA 3'-P ligase, RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
nan
Natrarchaeobaculum sulfurireducens AArc1
Brite
KEGG Orthology (KO) [BR:
nan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nan03016
]
AArc1_1602
Enzymes [BR:
nan01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
AArc1_1602
Transfer RNA biogenesis [BR:
nan03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
AArc1_1602
Prokaryotic type
tRNA splicing ligases
AArc1_1602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
AXR77935
UniProt:
A0A346PEJ0
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All DBs
Position
1577611..1579104
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AA seq
497 aa
AA seq
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MGVAVGDSCMSNLTFEANGITLEQVREHVWEIPQEGEMRVPARVLASESLLEEISEDKTL
EQLKNTTHLPGITNYAICMPDGHQGYGFPVGGVGAIDAENGCISPGAVGYDINCGVRMMK
TNLTYDELQGNEAELVDSLFANVPSGLGGGGIVEADIDTVDEILARGVDWALEHGHAVEE
DLLHCEDEGMREEADPSKVTQKAKDRGKNQIGSLGSGNHFLEVQRVTDVFDDEVGEAYGL
EEDQIVVLIHCGSRGLGHQTCNDYLRKIEKQHQGLLNQLPDKELAAAPAGSQLAEDYYGA
MNAAINFAWVNRQLIMHRTRKVFERVFDRSWEEMEMHLLYDVAHNIAKKETHIVDGEERD
LYVHRKGATRAFPAGHPDVPKAYRDVGQPVIIPGSMGAGNYVLRGGEHSMERTFGSTAHG
AGRLMSRTQAKNEFWGGDVQQQLEEQDKIYVKAQSGATVAEEAPGVYKDVDEVVSVSDDL
GIGDKVARTFPVCNIKG
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
ttgggcgtcgcagtcggagactcctgtatgagtaacctcacgttcgaggcaaacggcatc
acgctcgagcaggtgcgtgaacacgtctgggagatcccccaggaaggagagatgcgcgtc
cctgcgcgcgtccttgcgagcgagtccttgctcgaggagatttccgaggacaagaccctc
gagcaactgaaaaacacgacccatctgccggggatcacgaactatgcgatctgtatgccc
gacggccaccaggggtatggcttcccggtcgggggagtcggcgcgatcgacgccgaaaac
ggctgcatttcgccgggcgcggtcggctacgacatcaattgtggtgtcaggatgatgaaa
acgaacctgacctacgacgagctccaggggaacgaagcggaactcgtcgactcgctgttc
gccaacgttccctcgggactgggtggcggtggcatcgtcgaggccgatatcgacaccgtc
gacgagatcctcgcccgcggggttgactgggcgctcgagcacggtcacgccgtcgaagag
gacctgctacactgcgaggacgaggggatgcgcgaggaggcagacccctcgaaggtcact
cagaaggcgaaagaccgcggaaagaaccagatcggttcactcgggtcggggaatcacttc
ctcgaggtccagcgcgtgaccgacgtcttcgacgacgaggtgggcgaggcctatgggctc
gaggaggaccagatcgtcgtcctgatccactgcggctcgcgtggactgggccaccagacc
tgcaacgattacctgcgcaagatcgaaaaacagcatcaggggctgttgaaccagttgccg
gataaagaactcgcggccgcgcccgcgggctcgcaactcgcggaagactactacggggcg
atgaacgcggcgatcaacttcgcatgggtcaaccgccagctgatcatgcatcgcacgcga
aaggtcttcgagcgggtgttcgatcggtcctgggaggagatggagatgcacctgctgtat
gacgtggcccacaacatcgcgaaaaaagagacgcatattgtcgacggcgaagagcgcgac
ctctacgtccaccgcaagggggcgacgcgggccttcccggcagggcatcccgacgtcccg
aaggcctaccgcgacgtgggccagcccgtgatcatccccggcagcatgggcgcgggcaac
tacgtccttcgaggtggcgagcactcgatggagcggacgtttggctcgacggcccacggc
gcgggacgcctgatgagtcgcacgcaggcgaaaaacgagttttggggcggcgacgtccag
caacagctcgaagagcaggataagatctacgtcaaagcccagtcaggcgcgaccgtcgcc
gaggaggcccccggcgtctacaaggacgtcgacgaggtcgtcagcgtctcggacgacctc
ggcatcggcgacaaggtcgcccggacgttccctgtctgtaacatcaagggctaa
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