Natrarchaeobaculum sulfurireducens AArc1: AArc1_2245
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Entry
AArc1_2245 CDS
T05614
Name
(GenBank) Transcription initiation factor IIE, alpha subunit
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
nan
Natrarchaeobaculum sulfurireducens AArc1
Pathway
nan03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AArc1_2245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nan03021
]
AArc1_2245
Transcription machinery [BR:
nan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
AArc1_2245
Prokaryotic type
Archaeal type
TFE
AArc1_2245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Rad50_zn_hook
Sigma70_r3
DUF7129
Zn_ribbon_3
DNA_ligase_ZBD
Zn_ribbon_6
Zn_ribbon_8
RBD_AKAP-17A
Motif
Other DBs
NCBI-ProteinID:
AXR78561
UniProt:
A0A346PPE3
LinkDB
All DBs
Position
2226866..2227390
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AA seq
174 aa
AA seq
DB search
MAFEDLLEDPVIQKYLHELVGPKGMPVAAAPPDGEVTDEELAEDLDLELNDVRRALFILY
ENDLASYRRLRDEDSGWLTYLWTFEYGNIPENLESEMYRLHEALEERETYERNHEFYLCE
ICSIRFEFGEAMDFGFECPECGSPLDSMDNQRLVNAMHERIDALEDELNVDADA
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggcttttgaggacctgctcgaggatccggttatccagaagtacttacacgagctggtc
ggtcccaaagggatgcccgtcgcggcagcgccgcctgacggggaagtgaccgacgaggag
ctcgcggaggatctggatctcgagttgaacgacgtgcggcgggcgctgtttatcctgtac
gagaacgacctcgccagctatcgacggctgcgcgatgaggactcgggctggctgacctac
ctctggacgttcgagtacgggaacatcccggagaatctcgaatcggagatgtaccgcctc
cacgaggcgctcgaggaacgcgaaacgtacgagcgtaaccacgagttctacctctgtgag
atctgctcgatccgcttcgagttcggcgaggcgatggacttcggtttcgagtgtcccgag
tgtggctcgccactcgactcgatggacaaccagcggctggtcaacgcgatgcacgagcga
atcgacgcgctcgaagacgaactcaacgtcgacgcggacgcctga
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