Natrarchaeobaculum sulfurireducens AArc1: AArc1_3208
Help
Entry
AArc1_3208 CDS
T05614
Name
(GenBank) Excinuclease ABC subunit B, helicase
KO
K03702
excinuclease ABC subunit B
Organism
nan
Natrarchaeobaculum sulfurireducens AArc1
Pathway
nan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AArc1_3208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nan03400
]
AArc1_3208
DNA repair and recombination proteins [BR:
nan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AArc1_3208
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AArc1_3208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_22
DUF87
AAA_30
UB2H
Motif
Other DBs
NCBI-ProteinID:
AXR79513
UniProt:
A0A346PJ18
LinkDB
All DBs
Position
complement(3196349..3198406)
Genome browser
AA seq
685 aa
AA seq
DB search
MSDTQGPLQPDRPDVDHPFEVDAPFEPAGDQPEAIEQLAAGYQSGAEKQTLLGVTGSGKT
NTVSWLIEELQQPTLVIAHNKTLAAQLYEEFRTLFPDNAVEYFVSYYDYYQPEAYVEQTD
TYIDKDASINDEIDRLRHSATRSLLTREDVIVVASVSAIYGLGDPRNYVEMALRLEVGDD
VGRDDLLAQLVDLNYERNDVDFTQGTFRVRGDTIEIFPMYGRYAVRVELWGDEIDRMIKV
DPLEGETKGEQRAVLVHPAEHYSIPEPKLERAMDEIRTDLDSRISYFERKGDLVAAQRIE
ERTTFDLEMMAETGYCSGIENYSLYLSDRESGDAPYTLLDYFPEDFLTVVDESHVTLPQI
RGQYAGDKSRKDSLVENGFRLPTSYDNRPLTFEEFEQKTDRTLYVSATPSDYEREQSDRI
VEQIVRPTHLVDPKVEVSPATGQIDDLMDRIDERIERDERTLVTTLTKRMAEDLTEYLEE
AGVNVAYMHDETDTLERHEIIRSLRLGEIDVLVGINLLREGLDIPEVSLVAILDADQEGF
LRSETTLVQTMGRAARNVNGEVILYADEPSNAMESAIDETQRRRRIQQEYNAKHGLEPTT
IEKDIGETNLPGSKTDTSEVSGRSLEDDDEAARYVDELEDRMQEAANNLEFELAADIRDR
IREVREEFDLDGGEDEGIAPPTEEF
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacacgcaaggcccgttgcaacccgaccgtccggacgtcgaccacccgttcgag
gtcgacgcaccgttcgagcctgcgggcgaccagccagaagcgatcgaacagctcgcggca
ggctatcagtcgggggctgaaaaacagacgctactcggggtgaccggctccgggaagacg
aacaccgtctcctggctgatcgaggaactccagcagccgacgctggtgatcgcccacaat
aagacgctcgccgcccaactgtacgaggagttccgaaccctctttcccgacaacgccgtc
gagtacttcgtctcgtactacgactactaccagcccgaagcctacgtcgaacagaccgac
acctacatcgacaaagacgcctcgatcaacgacgagatcgaccggcttcgccactcggct
acgcgctcgctcctgacgcgcgaggacgtgatcgtcgtggcttcggtgtccgcgatctac
ggcctcggtgacccgcgcaactacgtcgagatggcgcttcggctcgaggtcggcgacgac
gttggccgcgacgacttgctcgcgcaactggtcgatctgaactacgagcgaaacgacgtc
gacttcacccagggcacgttccgggtccggggcgatacgatcgagatcttcccgatgtac
ggccggtacgccgtccgcgtcgaactctggggcgacgagatcgaccggatgatcaaggtc
gacccgctcgagggcgagaccaaaggcgaacagcgggcggtcctcgtccaccccgcagag
cactactcgatcccggagccgaaactcgagcgcgcaatggacgagatccgcacggacctc
gactctcggatctcgtacttcgagcgcaagggggacctcgtcgccgcccagcgcatcgag
gagcgaaccacgttcgacctcgagatgatggccgagacgggatactgttcgggcattgag
aactactcgctgtatctctcagatcgtgagtcaggtgatgcgccgtatacgctgctcgat
tacttccccgaggacttccttacggtggtcgacgaatcacacgtcacgctcccccagatt
cgcggccagtacgcgggtgataaatcccggaaggactcgctggtcgagaacggctttcgg
ctgccgaccagctacgacaaccggccgctgaccttcgaggaattcgagcaaaaaaccgac
cggacgctgtacgtgagcgcaacgccgagtgactacgagcgcgagcagagcgaccggatc
gtcgaacagatcgtccgccccacccacctcgtcgacccgaaagtcgaggtctcacccgcg
acgggacagatcgacgacctcatggaccgtatcgacgagcgcatcgaacgcgacgagcgc
acgctcgtcaccaccctcaccaagcggatggccgaagacctcaccgagtacctcgaggag
gcgggcgtgaacgtcgcctatatgcacgacgagacggacacgctcgagcgccacgagatc
atccgctcgctgcggctgggcgagatcgacgtcctcgtcgggatcaacctcctgcgggaa
gggcttgacattcccgaagtgagcctggtggccatcctcgacgccgaccaagaggggttc
ctgcgcagcgagaccaccctcgtccagacgatggggcgggccgcccgcaacgtcaacggc
gaggtgatcctctacgccgacgagccctcgaacgcgatggagtcggcgatcgacgaaacc
cagcgccgccgccggatccagcaggagtacaacgccaaacacggcctcgagcccaccacg
atcgagaaggacatcggcgagacgaacctcccaggaagcaagaccgacaccagcgaagtc
tccggacgctcgctcgaggacgatgacgaggccgcccgctacgtcgacgaactcgaagac
cggatgcaggaagccgcgaacaacctcgagttcgaactcgcggcggacatccgggaccgg
attcgggaggttcgcgaggagttcgacctggatggtggcgaggacgaagggattgcgcca
ccgaccgaagagttttag
DBGET
integrated database retrieval system
