| Entry |
|
|---|
| Name |
(GenBank) ATP-dependent DNA helicase PcrA
|
|---|
| KO |
|
|---|
| Organism |
nan Natrarchaeobaculum sulfurireducens AArc1
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:nan00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AArc1_4015
03430 Mismatch repair
AArc1_4015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:nan03400]
AArc1_4015
Enzymes [BR:nan01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AArc1_4015
DNA repair and recombination proteins [BR:nan03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AArc1_4015
MMR (mismatch excision repair)
Other MMR factors
AArc1_4015
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
pAArc1-01:complement(22402..25839)
|
|---|
| AA seq |
1145 aa
MSDDVPDWLPTIEDDEDPKPQQRTIIESERYPMRVLAGAGTGKTFTMVRKIENLIDEHGV
SPDRILALTFTNNAADSMREKLNVKLGPAGYDVDAYTYHSICNEILTDYAYDAGLDPDFE
IATDAEKYVIVLDVLDEIEYRAVKPNVYGPDSYGSGVASKLLSFIGSMKRSGISPAEIEE
YLGSPEQVYELDAVPDRIEEIAGDHLGGRSVSTVLDGISDTRADLVAERDTLRDEGLEAS
IKDFLNRLVDLCDALEVAFEEHEAGERSLPEDAHKLPKYLLGGYSSGAPSGIPNDLKLEL
TDYLRDALSECKTALDLNAGYEAYERELDRRNLLDFDGLVVKTVELLETDVGEGLGDRWD
YVFCDEFQDTDRLQFGLITSLVSEDRLFVVGDDDQAIYEWRGANVANITDELDDVFGPDL
EDEPLEQNFRSRQPILDLANEALERLADRRSTKTLTRVHEPDFDGDTVAVVEEADDEGDR
AEQLVTVTRNLLSGYAEALDRAYDPGEIALLVRNNDHATPILEGFDEAGIPYQVAGDLST
ESIGVGTVVAYLKALARPEEDDVSWNRVLTMRYRLTDADLRRVNSHDDGTYAGVCNQPLE
VFDEPNRIQEVREHIFRLLKLRETASLSHLYRELKRLTNIDWYLSEQERRDLAQLDEIID
QYGNDAVQPPLTPQFIDSLQHYDSLLEESGSAPTSQPELADDAVNVMTIHKSKGLDFPVV
LMPRLTADEWEPGSRTYDTFESALSEGPESAFDKDSVAQDANEARRILHVGITRAEEILV
LHGSRDEDDTDDERPVHDAVESILPESVPWRPGSGHLPIWRDLQECLPSDHADWTASLAS
TVVGDVSGQVTYGSEKLSASDGRDRVITFGNKLIEGSIEREPENRRFSIDALTGPMTPNP
ALQHSYTSLEAYEECPRQHFLDYVVNGFSDYRENGYGGDGISQRIVGLLFHDTAEIAAKE
QAAERAEWYAICERLAGQRRATDELPVAKECIDRYFDLDLSGWEIVDAEREFQLEVDGHE
LVGFIDAVYRTPDSELVVIDYKATERHRDIDENKQLPLYLLACRDLYEEPITRAGYAYVG
NIGPKIETRSFDEGELDSVRAAVSTTMDRINETSFSGYETGEHCRWCQHSSLPCGEEWRQ
ENGGR |
|---|
| NT seq |
3438 nt +upstreamnt +downstreamnt
atgagcgacgacgtgcctgactggctcccaaccatcgaagacgatgaggatccgaagcca
cagcagcggacgataatcgagtcggagcggtaccctatgcgagtactcgcgggtgcgggt
actggaaagacgttcacgatggtccggaaaatcgagaatctcatcgatgaacacggggtc
tctccggatcggattctcgcgttgaccttcaccaacaacgccgctgattcgatgcgtgag
aaactcaacgtaaaactcggaccagcaggttacgacgtcgacgcgtacacataccactct
atctgcaacgagatactgacggactatgcctatgacgcgggattagatccagacttcgag
atcgcaacggatgctgaaaagtacgtcatcgtactcgacgtcctcgacgagatcgaatac
cgtgccgtcaaacccaatgtctacggcccagattcatacgggagcggcgtcgcatcgaaa
ctcctctcgtttatcgggtcgatgaagcgaagtgggatttcgcccgcagagatcgaggaa
tatctcggatcaccggaacaagtctatgaactcgatgctgtgccagatcgtattgaggag
attgcaggcgaccatcttggtggccgttcagtttcgaccgtcctcgacggcatttcggat
acacgagccgacctcgtcgcagaacgggataccctccgcgatgaaggattagaggcgagc
attaaagacttcctcaaccgactcgttgacctctgtgacgcgctcgaagtggcgtttgag
gagcatgaggctggtgagcggtcgcttcccgaggatgcacacaagctgccgaaatatctg
cttggagggtacagtagtggagctccgagcgggataccaaacgacctgaagctcgaactg
acagactatctccgagatgccctcagcgagtgtaaaactgccctggatttgaacgcaggg
tatgaggcatacgagcgagagctcgaccggcgaaatctgcttgacttcgatggtctcgtg
gttaagacagtagagctgctcgagactgacgtcggagagggactgggcgatcgatgggac
tacgttttctgtgacgagttccaggacaccgatcgtctccagttcggcctcattacgtcc
ctcgtctcagaagatcgcctattcgtcgtgggcgatgacgaccaagcaatctacgaatgg
cgcggcgcgaacgtcgcgaacatcactgacgaactcgacgacgtcttcgggcccgatctc
gaagacgaaccgctagaacagaacttccggtcacgtcagcccattctcgacctcgcaaat
gaagcactagagcggttagcggatcggcggagtaccaaaacgctcacacgtgtccacgaa
cccgacttcgacggagacacggtcgcagtcgtggaggaagccgacgacgaaggcgaccga
gctgagcagttggtaactgtcacccgaaatcttctgagtggttatgcagaagcactagat
cgggcgtacgatccgggggaaatcgcactcctcgttcggaataacgaccacgcaacccca
attctcgaagggttcgacgaggcaggaattccctatcaggttgcgggggacctctccacc
gaatcaatcggggtcggcaccgtcgtcgcctatctaaaggcgctggcacgtcccgaagaa
gacgacgtaagctggaaccgggtactgacgatgcgttaccgtctcaccgatgctgatctg
cgtcgtgtcaatagccacgatgacggtacatatgctggggtatgcaaccaacccctcgaa
gtattcgatgagcccaaccgtattcaggaagtacgagaacacatttttcgccttctcaaa
ctacgtgaaacagcctccctcagccacctttaccgggaactcaaacgcctgaccaacatc
gactggtacctcagcgagcaagagcgtcgtgacctggcgcagctggacgagattatcgac
cagtatggaaacgacgctgtacagcccccactcacgccgcaattcatcgattcgctgcag
cattatgactcgctcctcgaggagagcgggtcggcaccgacaagtcagccagaactggcc
gacgacgcggtcaacgtcatgaccattcacaagagtaagggactcgactttcccgtggtt
ctgatgccccggttgaccgctgacgagtgggaaccagggtcacgaacctacgatacattc
gagtcagcactgtctgaaggtccagaatcagcattcgacaaagattccgtcgctcaagat
gccaatgaagcccgtaggatactccacgtagggatcacccgcgccgaagagatactcgta
ctccacgggagcagggatgaagacgacactgacgacgaaaggcccgtacacgatgctgtc
gagagcatcctcccagaatccgttccctggcggccaggtagcggtcatctcccgatctgg
cgcgatttgcaggagtgccttccatcggaccatgctgattggacagcctccctcgcgagc
acggtagttggggatgtctctggacaagtgacgtacggctctgagaagctctcagcatca
gacggacgagaccgggtaatcacattcggaaacaagctcatagaaggctcaatagagaga
gaacctgagaaccgacgattttcaattgacgccctgactgggccaatgaccccaaacccg
gcactccagcacagttacacctcacttgaggcctacgaggagtgcccccgacagcacttc
ctggactacgtcgtcaacgggttctccgactaccgcgagaacggctatggcggagacggt
atctcacagcggatagtcgggcttctgtttcacgataccgcagagattgctgcgaaggaa
caggcagcagagcgagcagaatggtacgctatctgtgagcggctggccggacaacggcgt
gccacggatgaattaccggtcgcgaaggaatgcatcgaccggtatttcgacctcgatcta
agcggctgggaaatcgtcgatgctgaacgagagttccagctagaagtggatggccacgaa
ctcgtcgggtttatcgacgccgtctatcggaccccggacagtgagttggtcgtcatcgac
tacaaagccaccgagcgtcaccgagacattgacgagaacaagcagctgccactgtacctg
ctcgcctgtcgtgacctctacgaggaaccgattacccgcgcgggatacgcctatgtcggc
aatatcggtccgaaaatcgagacccgttcgttcgatgaaggtgaattagattcagtacga
gcagcagtgtcgacgacgatggatcgaatcaatgagacatcgttcagcgggtacgagact
ggagaacactgtaggtggtgccagcacagttcccttccctgcggggaagaatggcgtcaa
gaaaacggaggccgctag |
|---|
