Candidatus Nanosynbacter sp. HMT-352: LR957_00065
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Entry
LR957_00065 CDS
T09649
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nanh
Candidatus Nanosynbacter sp. HMT-352
Brite
KEGG Orthology (KO) [BR:
nanh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nanh03016
]
LR957_00065 (truB)
Enzymes [BR:
nanh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LR957_00065 (truB)
Transfer RNA biogenesis [BR:
nanh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LR957_00065 (truB)
Prokaryotic type
LR957_00065 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
LON_substr_bdg
Motif
Other DBs
NCBI-ProteinID:
UHA57393
LinkDB
All DBs
Position
11867..12523
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AA seq
218 aa
AA seq
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MDEVIIIDKPQGMTSFGVVARLRRVLSNQAGKKVKVGHTGTLDPFATGLMIIVTGKKCRE
AETFTKLDKWYEAEIILGKNSSTGDPEGEITDVSDYEPSLEEVQWVIGQFVGKIEQTPPI
FSAIKINGERAYKLAREGKQVEIPKRVIEIYSLELLTYEYPKLKIRTHVSSGTYIRTLAV
DIGEKLGTGAYCENLRRTKIADYSIDQAKTLADFGITS
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagtgattatcatagataaaccccagggaatgactagctttggggtggtggca
cgcttgcgacgagttttatctaatcaggcgggaaagaaggtgaaggttggccatacgggt
acgcttgatccgtttgctactgggctaatgattattgtgactggaaagaaatgccgcgaa
gctgaaactttcactaagttagataagtggtacgaggcggaaattattctgggcaagaat
agttcgacaggtgatccggaaggcgaaattactgatgtgtctgattatgagccgagtttg
gaagaagttcagtgggtaatcggtcaatttgtgggaaaaattgagcaaacaccgccaatt
tttagcgcaataaagattaatggtgaaagagcgtataaattggcgcgcgaaggtaaacaa
gttgagattcctaagcgcgtgatagaaatttactcattggaactattgacatatgaatat
cccaaattaaagatcagaactcacgtttcaagtggaacttatattcggacgctggcggtg
gatattggcgagaaattggggacgggcgcgtattgtgagaatttgcgtcgaacaaaaata
gccgactattctattgatcaggcgaagactctggcggactttgggattactagctaa
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