Candidatus Nanosynbacter sp. HMT-352: LR957_00170
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Entry
LR957_00170 CDS
T09649
Name
(GenBank) GspE/PulE family protein
KO
K02652
type IV pilus assembly protein PilB
Organism
nanh
Candidatus Nanosynbacter sp. HMT-352
Brite
KEGG Orthology (KO) [BR:
nanh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
nanh02044
]
LR957_00170
02035 Bacterial motility proteins [BR:
nanh02035
]
LR957_00170
Secretion system [BR:
nanh02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
LR957_00170
Bacterial motility proteins [BR:
nanh02035
]
Pilus system
Pilus assembly proteins
LR957_00170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_14
nSTAND3
AAA_16
AAA_22
AAA_29
ABC_tran
DUF87
Rad17
Motif
Other DBs
NCBI-ProteinID:
UHA57413
LinkDB
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Position
34399..36159
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AA seq
586 aa
AA seq
DB search
MALLTDDIQDKLIELLVNEGLIEKSVIDDALKRASESGKPLFSLLSEEGLLDNELLVHGV
AQVSGVPYVNLSNSVISQDILSLLPSDVAERFMAVPLAEVQNRLAVAMIDANNVQAVDYL
SNRIQRPIKVFMASEESVRHVLDQYKTDLSSVNVAAQASQEESLSEAGNIKTIVQDSPIS
RALSTILEYAVKSHASDVHIEPLEKALKIRCRVDGVLREIMQLPKSIEPALVSRIKILSN
LKIDEHRIPQDGQFAVNVAGKEVDLRIAISPVVWGEQVVIRLLDKSGSSFNLEDMGYAGR
ALRTIRKGIKRPNGMILTSGPTGSGKSTSLYALIKEIKDDTVNIVTLEDPVEYKMDGVNQ
IQVNAEVGLTFASGLRSILRQDPDIVMVGEIRDNETANLAIQAALTGHLVFSTLHTNSAA
GVLPRLLDMGIEPFLIASTVNTIIGQRLVRRVARHRDIYQSSPLETQAIREAVGGLLPQT
REQVAQYAQDLGYESLPLATQTSFALAKGKDTPQTPRGYAGRAGLYEVMDITEEIQNLIV
KRATSAEIQRMAIQQGMITMRQDGYLKALNGITTIEEVNRVAADTA
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggctttactgacggacgacatccaagataagttgatcgagctgctcgtaaacgagggg
cttattgagaagtctgtcattgatgatgccttaaagcgcgcctctgagagcggtaaacct
ctgtttagtctgcttagtgaagaggggttgcttgacaatgaactattagttcatggtgtg
gctcaagtttcgggcgtgccgtatgtcaatctgtcgaatagtgttattagccaggatatt
ttatctctattaccgtccgacgttgctgagagatttatggctgtgccgctggccgaggtt
cagaaccgactagcagtagcgatgatcgacgcgaataatgttcaagcggtggactatttg
tcgaatcgcatccagcgtccgataaaagttttcatggcctcagaagagagtgttcgtcac
gtcttggatcaatataagactgacttgtcgtctgttaatgtggctgcacaggcttcgcag
gaagagtctttgtcggaggctggcaatattaaaacgattgtccaagattcaccgatatca
cgagcgttatcgacaattttggagtatgcggtaaaaagtcatgcgtccgacgtgcatatt
gagccattagagaaggctttgaagattcgttgtcgtgttgacggtgttttgcgtgaaata
atgcagctcccaaagagtattgagccggcgttagttagtcgcattaagattctttccaat
ctgaaaattgacgagcatcgaattcctcaggatggtcaatttgcggttaacgtcgcaggc
aaggaggttgatcttcgtattgctatctctccagttgtctggggtgaacaagtggttatt
cgtctgcttgataagagtggaagttcttttaatctggaagatatgggctacgctgggcgc
gcattaagaacgatccgtaaggggattaagcgaccaaatggaatgattctgacgtcaggt
ccaactggttctggtaagtcaacgagtttgtatgcgttgattaaagagattaaagacgac
actgtgaatattgtgacgcttgaagatccggttgagtataagatggatggcgtcaatcag
attcaggtgaatgcggaagttggcttgacgtttgcttctggattgcgctcaattttgcgt
caagacccagacattgtgatggttggtgagattcgcgataatgaaacggcgaatttggcc
attcaggcagccttaacggggcacttggttttctcaacacttcacactaattctgccgct
ggtgtgttgccgcgtctattagatatgggaattgagccgtttcttatcgccagtacggtt
aacacaattatcggtcagcgtttggtgaggcgagtggcgcgccatcgggatatctatcaa
tcatcgccgttagagacgcaggcaattcgcgaggcggttggtggattattgccgcaaaca
agggagcaggttgctcaatacgcgcaagatttgggatatgaaagtttgccgctagcgaca
cagacgtcgtttgccttggcaaaaggaaaagatacgccgcaaactcctcgcggttatgct
ggtcgagctggtttgtatgaggtcatggatattactgaagagattcagaatttgattgtt
aagcgcgcgacctcagcggaaattcagcgaatggcaattcaacagggtatgattacgatg
cgtcaagatggttatttgaaggcgttgaacggaataacgacaatagaagaagttaatagg
gtagcggcggataccgcgtaa
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