Candidatus Nanosynbacter sp. HMT-352: LR957_00180
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Entry
LR957_00180 CDS
T09649
Name
(GenBank) type II secretion system F family protein
KO
K02653
type IV pilus assembly protein PilC
Organism
nanh
Candidatus Nanosynbacter sp. HMT-352
Brite
KEGG Orthology (KO) [BR:
nanh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
nanh02044
]
LR957_00180
02035 Bacterial motility proteins [BR:
nanh02035
]
LR957_00180
Secretion system [BR:
nanh02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
LR957_00180
Bacterial motility proteins [BR:
nanh02035
]
Pilus system
Pilus assembly proteins
LR957_00180
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
DUF4199
Fig1
Motif
Other DBs
NCBI-ProteinID:
UHA57415
LinkDB
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Position
37245..38459
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AA seq
404 aa
AA seq
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MKKYDYEARDSASNKIVKSVVQADSENAAAKLLTSQGFVPLKIELQDDKTSLFAKFSGRI
TTKDKVVFTRQLATLIGAGLPLAQSLRTVQEQTTNKRMQEIVQEIISDVEGGKSLSDSFA
KHPEAFNKVYVALVSAGETSGTMDDSLKRLAAQQEKDAAMMSKIRGAMMYPSIVLVVIIL
VIGFMLFTVVPQVEGLYRDLNKELPFVTLVMIKIANFFIHLWWLVILAMIIGGYFLVQYL
KTEQGIRTKDTFKLNIPMFKGMFRKMYMARFARTGQVLLSTGVPMLDMLRITSDAVNNVI
ISESILRASDKVKGGKALSTSLSNEDYFLAMVPQMIKIGEQSGKIDEMMGKTAQVYEDEL
DEEIRALSTAIEPVLMVFLAIVAGTMVAAILLPIYSLVGNINIR
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatatgattacgaagccagagatagcgcaagtaataaaatcgttaaatcagtt
gttcaggctgatagtgaaaatgccgccgcgaagcttttgacgtcacaagggtttgtgcca
ttaaaaattgaactacaagacgataagaccagcttatttgcaaagttttctggcagaatt
accaccaaggataaggttgtatttactcgtcagctggctacacttattggtgcaggacta
cctttggcacaaagtcttcgaacggttcaggagcaaactacgaataagcgcatgcaggaa
attgttcaagagattatttctgacgttgaaggcggtaaatccttgtccgattcgttcgca
aagcatccagaagcttttaacaaagtttatgtagctttagtctcggccggcgagacgtca
ggtacgatggatgattcgcttaagaggttagctgctcagcaggaaaaagacgccgctatg
atgagtaaaattagaggtgctatgatgtatccgtcaatcgtcttggtagtgattatattg
gtcatcggatttatgttatttacggttgttccgcaagttgaggggctgtaccgtgactta
aataaagagttgccatttgtaactcttgtgatgattaaaatagcgaacttttttattcat
ctttggtggcttgttatattggcaatgattatcggcggttatttcctagtacaatatttg
aaaactgagcagggaattaggactaaagacacctttaagctcaatatcccaatgttcaag
gggatgttcagaaaaatgtatatggcacgatttgccaggactggtcaagttcttctgagt
actggcgttccgatgcttgatatgcttcgtattacgtctgatgctgtcaataacgtgatt
attagcgaaagcatacttcgcgcatcagacaaggtgaagggtggtaaggctttgtcgact
tctttatctaatgaagattatttcctagcaatggtgccgcagatgattaaaatcggtgag
cagtcgggtaaaattgatgagatgatgggtaagaccgctcaagtgtatgaagatgagctt
gatgaggaaattcgcgccttgtcgacggcgatagagccagttttgatggtcttcttagct
atagttgcaggtacgatggtcgcggctatcttgcttccaatctatagcttggttggcaac
atcaatattcgctag
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