Candidatus Nanosynbacter sp. HMT-352: LR957_00260
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Entry
LR957_00260 CDS
T09649
Symbol
thrS
Name
(GenBank) threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
nanh
Candidatus Nanosynbacter sp. HMT-352
Pathway
nanh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nanh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LR957_00260 (thrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nanh01007
]
LR957_00260 (thrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nanh03016
]
LR957_00260 (thrS)
Enzymes [BR:
nanh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
LR957_00260 (thrS)
Amino acid related enzymes [BR:
nanh01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
LR957_00260 (thrS)
Transfer RNA biogenesis [BR:
nanh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LR957_00260 (thrS)
Prokaryotic type
LR957_00260 (thrS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
tRNA_SAD
HGTP_anticodon
Motif
Other DBs
NCBI-ProteinID:
UHA57428
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All DBs
Position
49412..51223
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AA seq
603 aa
AA seq
DB search
MSEEELRSMRHSLAHIMAQAIQHLWPQAKFGVGPAIDNGFYYDVYLDNGTISEADLPKIE
KEMRKIIAADYPLERRDVSVEEAIDWAIKGDQSFKVELLNDLKRSGTTVASELTGEKMGS
VSDGDSKVETVSLYSQGDYTDLCRGGHVDSTGKVGVFKLTKTAGAYWRGSENNPQMQRIY
GVAFATQEELDEYLNRLEIAKQRDHRKLGRELDLYTTSPLVGIGLPLFTPRGTILRDIVA
QYSNQLRQKFGFEKVWTPHITKKDLYETSGHWAKFGEELFLVKSQETSDEMALKPMNCPH
HTQIFASRPRSYRDMPVRYLETTTDYRDEKTGELGGLNRVRSLTQDDSHIFCRTDQIEDE
INNLLSAARELYRSIDMKLRVRLSYRDESNSYLGDLGLWDSAQNQLKSAVEKVGLDYFEQ
EGEAAFYGPKIDFMATDAIGREHQVATVQLDFVQPQRFGLEYTDNDGNFTAPVMIHCALL
GSIERFLSVFIEHTGGWFPFWAAPEQVRILTINDTVLEYVDKITTILSDITLMKPVRYND
VRFTINSRNESLGKKIREATSMKIPVQLIVGPKDMEASEVSVRTQSGEEKISLEQLAEYI
KSL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaagaattaagatctatgagacatagtctagcgcacattatggcgcaggct
attcagcatttatggcctcaagcgaagttcggtgtgggtccagctatcgataatggcttt
tactatgatgtctatcttgacaacgggacaatttctgaagctgatcttccgaagatagaa
aaggagatgcgaaagatcatagcggctgattatccgcttgaaaggcgcgatgtgtcggta
gaagaggctattgattgggctataaagggagatcagtcatttaaggtggaactactgaat
gaccttaagcgatctggtactacagttgctagtgaattgactggagaaaaaatggggtct
gtgtctgatggcgatagtaaagttgagactgtttctttgtattctcagggtgattacact
gatttgtgtaggggcggacatgtggatagcactggaaaggttggcgtatttaaacttact
aagacggctggagcgtattggcgaggcagtgaaaataatccacaaatgcaacgaatatat
ggtgtagcgtttgctacgcaggaagagctggatgaatatctgaatagattggagattgca
aaacagcgagatcatcgcaaattaggtagggagcttgatttgtatacaacttcacccttg
gtggggattggtttacctttgtttactcctcgcggtacgattttacgagatatagtggct
caatattcgaaccagctgagacagaagtttggctttgaaaaagtatggacgcctcatatt
acgaaaaaagatctatatgaaacatcgggacattgggctaagtttggagaggaattattt
ttagttaaaagccaggaaactagcgacgagatggctcttaagcctatgaactgtccacat
catacgcaaatttttgcctcacgaccgcgaagttatcgtgatatgccggtaagatacttg
gagacgacaacagattatcgtgacgaaaaaactggcgagctgggcggattgaatcgagtt
cgctcactaacgcaagatgatagccatatattttgtcgtactgatcagattgaagatgag
attaataatttattgtcggctgcccgcgagctatatagatcaattgatatgaagctcagg
gttcgcttgagctaccgtgatgaatccaactcgtacctgggtgaccttggcttatgggat
tccgcacagaaccagttaaagtctgctgttgagaaagtaggtttggattatttcgaacaa
gagggtgaggcggcattttatggtccaaagattgactttatggcgacggatgcaatcggt
cgtgaacatcaagttgcaactgtgcagctggattttgtgcaaccacaaaggtttggtttg
gaatatacggataatgatggcaattttacagcaccagttatgattcactgtgccttattg
ggctcaattgagcgattcttaagtgtgtttatagaacatactggcggatggtttccgttt
tgggcggctccggaacaagttcgtattttgacgattaacgacacggtgttagagtatgtt
gataaaataacaactatattatcagacattactctcatgaagccagttagatataacgat
gtaagatttacaataaactctagaaatgaatcattaggcaagaagattagggaagctact
tctatgaagatacctgttcaacttatcgtaggaccaaaggatatggaagctagtgaggtt
agtgttcgcacgcaatctggtgaagaaaaaatatcattggagcagcttgctgagtatata
aaatctttatag
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