Candidatus Nanosynbacter sp. HMT-352: LR957_00635
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Entry
LR957_00635 CDS
T09649
Symbol
recF
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
nanh
Candidatus Nanosynbacter sp. HMT-352
Pathway
nanh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nanh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LR957_00635 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nanh03400
]
LR957_00635 (recF)
DNA repair and recombination proteins [BR:
nanh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LR957_00635 (recF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_29
AAA_21
ATPase_2
AAA_16
AAA
ABC_tran
AAA_25
AAA_22
AAA_30
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
UHA57493
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All DBs
Position
complement(118037..119089)
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AA seq
350 aa
AA seq
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MISKIKLYNFRSYHLHEAAFSNSGTVIVGPNGTGKTNLLEAVYVALRGSSFRGSLSDCMT
LNAPQTIVHLEGDFGERRIKLDSISGKINKEFIINDNKSKVLTRKNRLPVVLFEPSELRL
ISSSPSRRRDFLDGLIARLDPKYDTDLRAFNRTLLQRNELLKSHQEDSSIWRDNLFAWDI
KFVQYATNIAQKRAKFLQINEPRIKNLYESLAGKDTQLSIEYGAIVPLENYDQALLNRLG
KSREYEIVTGFTSAGPHREDFTIFLHNQPAIKVASRGEMRTIMLAFKLLELELQTEVSQS
RPLILLDDVFSELDATREKLLQETIQNHQFIVTTTDARHQKDGCSIISTQ
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
gtgatttctaagattaagctatacaatttccggtcttatcatctgcacgaagcggctttt
agcaattctggtacggtaattgttggaccaaatggcaccggcaagacgaatttgctcgag
gcggtttatgtagcgctgcgcggcagtagttttcggggcagccttagcgactgtatgacg
ctgaacgctccgcaaacaattgttcatctggagggcgatttcggcgagcgacgtattaag
ctagactcaatttctggaaaaatcaacaaagaattcatcatcaatgacaataaatcaaaa
gtcttaaccagaaaaaaccgcttgcctgtcgttttgtttgagccaagcgaactaagattg
atttcctcttcaccatcccgacgacgtgattttctggacggcttaattgcccgacttgac
cccaaatatgacacggatttaagagctttcaatcgtactcttttacaacgcaacgagctc
ttaaaatcccaccaagaagactcatcaatttggcgcgataacctgtttgcttgggatata
aaatttgtccaatatgcgaccaacattgcccaaaaacgagccaagtttctccagataaac
gagcctcgtataaaaaatttatacgaatctttagcgggaaaagatacacaattgtccatt
gaatacggcgctattgtacctctggaaaattacgaccaagccctacttaatcgcttagga
aaatcccgcgaatatgaaatagtcacaggatttacttctgctggcccgcatcgcgaagat
ttcacaattttcctccataatcagcccgccattaaagttgcttcacgcggcgaaatgcga
acaattatgttggcgttcaaattattagagctagaacttcaaacggaagtcagccaatct
cgaccgctaattctactggacgacgttttttctgaattagatgccacacgcgaaaaactt
cttcaagaaaccatccagaatcatcaatttatcgtcactacgacagatgcgcgccaccaa
aaagacggctgctcaataatttccacacaataa
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