Candidatus Nanosynbacter sp. HMT-352: LR957_00755
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Entry
LR957_00755 CDS
T09649
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
nanh
Candidatus Nanosynbacter sp. HMT-352
Pathway
nanh00550
Peptidoglycan biosynthesis
nanh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nanh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LR957_00755 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LR957_00755 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nanh01011
]
LR957_00755 (murD)
Enzymes [BR:
nanh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LR957_00755 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
nanh01011
]
Precursor biosynthesis
Amino acid ligase
LR957_00755 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
MutL
Motif
Other DBs
NCBI-ProteinID:
UHA57517
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Position
142992..144236
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AA seq
414 aa
AA seq
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MKIVIAGFGVEGQSNLRYFREKFPEADFLVADEREKVDNLSENVAYQTGFSGLEDADLII
RSPSLPPKKINTSGQIWSSTNEFFANCPATIIGVTGTKGKGTTCSFISSILRAAGKTVHL
VGNIGVPALDILPKIEKNDIVVYELSSFQLWDLQKSPHVAVVLMIEPDHLNIHADFNDYL
AAKANITKSQTADDYVVYNSQNEFSSSIADTSSAQKKEYPFILSDDITSAIRLPGKHNID
NACAAIAAVKSILPNVLDDEIKKGLSEFTGLPHRLKFVAEKYGVKYYDDSISTTPGSAIA
ALKAFAEPKILILGGSDKGADYSELAQEIARQNVRLIIINGANSDEIREVLREEKIDCEI
IQLNMAEMKEVAKLAKNKAQFGDVVILSPAAASFDMFKSYSDRGEQFVAAVEEL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgtcattgctggttttggtgttgaaggtcaatctaatttgcgttattttcga
gagaagtttccggaagctgattttttagtggcggacgagcgtgaaaaagtagataatttg
tcggaaaatgtggcttatcagacgggattttcggggctggaggatgcagatttaatcatt
agatctccgagtcttccgccaaaaaagataaatactagcggtcaaatttggtcatctact
aatgaattttttgccaattgcccagcgactataattggcgtgactggcacaaaaggcaag
gggacgacgtgtagttttatctcgtcgattttgcgcgcggcaggtaaaaccgttcatttg
gtgggaaatatcggcgtgccagctttagatattttgccaaaaattgagaaaaatgacatt
gttgtttatgaattgtccagttttcaattgtgggatttgcagaaatctccgcacgttgcc
gtggtgctgatgattgaacctgaccacttgaatatccacgctgattttaatgattatttg
gcggcaaaagcgaatattactaagtctcaaaccgctgacgattatgttgtctataattct
caaaatgagtttagttcgtcgattgcagatacgagttcggcacaaaaaaaggaatatcca
tttattctttcggacgatataacttctgcgattcgcttgccggggaaacataatattgac
aatgcgtgcgcggcgatagcggcggtgaaatcgattttgccgaacgtgttggatgatgag
ataaagaaggggcttagcgagtttacggggctaccacatcgattgaagtttgttgctgaa
aaatacggcgtgaaatattacgatgatagcatttcaactacgccaggtagcgcgattgcg
gcattaaaagcttttgcggagccgaagattttaattttgggtggctcggataaaggtgcc
gactattcagaattggcacaagaaattgccagacaaaacgtacgactgataattatcaat
ggcgctaactctgatgaaattagggaagtcttaagggaagaaaaaattgattgcgaaatt
atccagttgaatatggcagaaatgaaagaggttgctaaattagctaaaaataaagcgcaa
tttggcgacgtggtaattcttagcccggcggccgccagttttgatatgtttaagagttat
tctgatcgtggcgagcaatttgttgccgccgtagaagagctttaa
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