Candidatus Nanosynbacter sp. HMT-352: LR957_01100
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Entry
LR957_01100 CDS
T09649
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
nanh
Candidatus Nanosynbacter sp. HMT-352
Pathway
nanh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nanh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LR957_01100 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nanh03400
]
LR957_01100 (xth)
Enzymes [BR:
nanh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LR957_01100 (xth)
DNA repair and recombination proteins [BR:
nanh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LR957_01100 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
COMM_domain
Motif
Other DBs
NCBI-ProteinID:
UHA57584
LinkDB
All DBs
Position
complement(211710..212510)
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AA seq
266 aa
AA seq
DB search
MKLFSWNVNGIRAVINKGEFAKFIDTYDPDILCLQETKATRDQVEIDLPNYYEHFYSAAK
KGYSGTAIFSKIPPLNWRDGFPLNIIKQFDLTGDEYGNPADEGRIITAEFDYFWVVNCYT
PNSKGDLSRLDLRYKKWDKAVLAYLEELELSKPVLYCGDMNVAHQEIDLANPKPNVGKHG
FTDEEREGFQNYLDAGFIDTFRAAFPEKTGAYSWWTHWANARARNVGWRIDYWLASREIA
NRVTNPQIHPEQMGSDHCPVSIEVNL
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgaaattattttcctggaatgtaaacggtattcgcgcagttatcaacaagggtgaattc
gcaaagttcatcgacacgtacgatccagatattctgtgcctgcaggaaactaaggccacc
agagatcaagttgaaattgacctgccaaattattacgagcatttctattccgccgccaaa
aaaggctattctggcacggcaattttctctaaaatcccacctctgaattggcgcgacggt
tttccactaaacatcattaagcaatttgatttaacgggcgacgaatacggcaatccagcc
gacgaaggacgaattatcaccgccgagtttgactatttttgggttgtcaattgctacact
ccgaactcaaaaggggatttgagccgattagatttgcgatataaaaaatgggacaaggca
gttctggcttatctggaagaattggaattgtcaaagccagtcctttattgtggcgatatg
aacgtggcacatcaggagattgatttagcaaatccgaagcctaacgttggcaaacacggc
tttactgatgaggagagggaaggttttcagaactatttggacgctggatttattgacact
ttccgggcggctttccccgaaaaaactggcgcgtacagttggtggacacactgggcaaat
gccagagcgcgaaatgtcggttggcggattgactattggctagcgtcgcgtgaaattgca
aatcgcgttactaatccgcaaatccatccagaacaaatgggcagcgatcattgcccggtg
agcattgaggtaaatttgtaa
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