Candidatus Nanosynbacter sp. HMT-352: LR957_01960
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Entry
LR957_01960 CDS
T09649
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
nanh
Candidatus Nanosynbacter sp. HMT-352
Brite
KEGG Orthology (KO) [BR:
nanh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nanh03400
]
LR957_01960 (radA)
DNA repair and recombination proteins [BR:
nanh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LR957_01960 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_16
AAA_22
AAA_30
PAXNEB
nSTAND3
AAA_24
SLFN-g3_helicase
Lon_C
Zeta_toxin
DUF7125
SRP54
AAA_14
AAA_5
NACHT
AAA
NTPase_1
GvpD_P-loop
DAP3
ATP-synt_ab
KTI12
RsgA_GTPase
DZR
NB-ARC
AAA_29
MCM
Rad51
GvpD_bR2
ABC_tran
ATPase_2
AAA_19
AAA_33
RNA_helicase
DUF7129
zf-C2H2_6
HypA
Motif
Other DBs
NCBI-ProteinID:
UHA57073
LinkDB
All DBs
Position
complement(364112..365461)
Genome browser
AA seq
449 aa
AA seq
DB search
MAKARSQFVCQQCGASFSKWAGRCENCGEWNSLVEQVVSSGGSSVVDKSAGRGKALKTSS
IREAASESGLERLSTGIDDLDTVLGGGFLVGGVVLVAGQPGIGKSTLLAQVAAYIAKAKS
VLYVSGEESVSQVKLRAERLGAADSEKMQLASSNSAEDIAASIQQGGYDLAIVDSVQTIS
LSEISSAPGSVSQITNSSNVIIRAAKASGTAVILVGHVTKEGSIAGPKILEHLVDVVLNF
EGDRYGGFRVVRTQKNRYGSTNEAAIFEMDEQGLRIVKNPSAELLSERQNLDGSIVLATM
EGARPLLVEIQALVNPTNFGYPKRTASGFDLNRLNLLVAVLEKRTKLKLADKDIYVNVVG
GLKLNDPAADLAVAMAIASASAGRSLDEGAVVFGEIGLGGEVRSATNWQARIKEAKKLGF
TYAIAPKVHKDKFIKGVSDMRQALIDYLQ
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagctagaagtcaatttgtttgtcagcagtgcggggctagtttttcaaagtgg
gctggcaggtgtgaaaattgtggggaatggaattcgctagtcgagcaggtcgtttcttct
ggcgggtcatctgttgttgataaatctgccgggcgcggcaaagccttgaaaacgtctagc
attcgtgaagctgcctctgagtctggattagaaagattaagtacgggaattgacgatttg
gacactgttttgggtggtggatttttggttggcggcgtggtattagtggcgggtcagcca
ggaattgggaaaagtacgcttttggcgcaagttgcggcatatattgccaaggcaaaatcg
gtgctatatgtaagcggcgaggagtcagtttctcaggtgaagcttcgtgcggagcgtttg
ggtgcggctgattcggaaaaaatgcagctagcgtccagtaatagcgcggaagatattgca
gcgtcaattcagcaaggtggatatgatctggcaattgtcgattcggttcagacaatttct
ctcagtgagatttcctcggctcctgggtctgtcagtcaaatcaccaactcgtcaaatgta
atcattcgtgccgccaaagcttcgggtacggcggtgattttggttggtcacgtcactaaa
gagggctcaattgctggtccgaaaatattagagcatttggtggacgttgtgctgaatttt
gagggcgatcgatatggcggttttcgagtcgttcgtacgcagaagaatcgatatggttcg
actaacgaagcggcaatttttgaaatggacgagcaggggctaagaatcgtgaagaatccg
tcggcggaacttctgtcagagcggcagaatctggatggatcaattgtactggcgaccatg
gaaggtgcgcgtccgcttttagtggaaattcaggcgctagttaatccaacgaattttggc
tatcctaagcgcacggcgagtggttttgatctgaatcgattgaatctattggtggcggtt
ttagagaagagaaccaagttgaagttggcggacaaagatatttatgtcaatgtggttggc
gggctgaaattaaatgatccagccgctgatttggctgtagcgatggcgattgctagcgct
agcgctgggcgaagtctggacgaaggcgccgtagtgtttggcgagattggtttgggtggt
gaggttcgctcggcaacgaattggcaagctcgaattaaagaggcgaagaaactaggcttc
acttatgcgattgcgccaaaagttcataaagataaatttataaaaggcgtcagcgatatg
cgacaggcgctgattgactatttacaatag
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