Candidatus Nanosynbacter sp. HMT-352: LR957_02240
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Entry
LR957_02240 CDS
T09649
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
nanh
Candidatus Nanosynbacter sp. HMT-352
Brite
KEGG Orthology (KO) [BR:
nanh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nanh03019
]
LR957_02240 (rnc)
03009 Ribosome biogenesis [BR:
nanh03009
]
LR957_02240 (rnc)
03036 Chromosome and associated proteins [BR:
nanh03036
]
LR957_02240 (rnc)
Enzymes [BR:
nanh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LR957_02240 (rnc)
Messenger RNA biogenesis [BR:
nanh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LR957_02240 (rnc)
Ribosome biogenesis [BR:
nanh03009
]
Eukaryotic type
90S particles
RNase
LR957_02240 (rnc)
Prokaryotic type
rRNA processing factors
LR957_02240 (rnc)
Chromosome and associated proteins [BR:
nanh03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LR957_02240 (rnc)
BRITE hierarchy
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
UHA57127
LinkDB
All DBs
Position
complement(420102..420818)
Genome browser
AA seq
238 aa
AA seq
DB search
MSGMNTAPYQEFAREKLGFEFTNLDLLITALTHRSYVNEHRKSVHHHNERLEFLGDAVLE
LAVTEYLFTHFSEPEGILTAWRAALVRTESIGDAGDKLGYGPLIRMSKGEKNGSERAHLQ
ILANAFEAVIGAIYLERGFDDARDFIHKHIIVKLDGILESGSWRDPKSYLQEISQRVDNQ
TPIYKVLSEEGPDHDKVFTLGVFVGDNMMGRGIGPSKQVAQQQAARAAIAKYKESGEK
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaatgaacacggctccgtatcaagagtttgcgcgcgaaaaattaggttttgaa
tttacgaatttggatttgctgattacagctttgactcaccgtagctatgtgaatgagcat
cgaaaatccgttcatcatcacaatgagcgcttggaattcttaggtgatgcggttctggaa
ttggcggtaacagaatatttgtttacgcatttttctgagccagagggaattttgactgct
tggcgggcagctttggtacgaacggaaagtattggcgatgctggcgataagttgggttat
ggtccgctgattcgtatgtcaaagggtgagaagaatggctcagagcgagcgcatttacag
attttagctaatgcgtttgaggcggtaatcggcgcgatttatttggagcgcggctttgac
gatgctcgcgattttattcacaagcatataattgttaagctggacggaattttagagtct
ggcagttggcgcgatccgaagtcatatttacaggaaatttctcaacgagttgataatcaa
acgccaatatataaagttctgagcgaagagggtccagaccacgacaaagtctttactctt
ggggtttttgttggcgataatatgatggggcgaggcattggtccatctaagcaagttgct
caacagcaagctgctcgtgctgcaattgctaaatataaagaatctggcgagaaatag
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