Candidatus Nanosynbacter sp. HMT-352: LR957_02825
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Entry
LR957_02825 CDS
T09649
Name
(GenBank) RimK family alpha-L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
nanh
Candidatus Nanosynbacter sp. HMT-352
Brite
KEGG Orthology (KO) [BR:
nanh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nanh03009
]
LR957_02825
Ribosome biogenesis [BR:
nanh03009
]
Prokaryotic type
ribosomal protein modification factors
LR957_02825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Rimk_N
GSH-S_ATP
ATPgrasp_ST
ATP-grasp_3
CPSase_L_D2
GARS_A
Dala_Dala_lig_C
ATPgrasp_YheCD
ATP-grasp
LysX_preATP_grasp
Motif
Other DBs
NCBI-ProteinID:
UHA57232
LinkDB
All DBs
Position
complement(527721..528638)
Genome browser
AA seq
305 aa
AA seq
DB search
MRIAILSNGNINYSTLRLKEEAEKRGHQVKVIKYKNCYVSIDEKHPTVIYKGKEIGEFDV
VIPRIASHMTKYGTAVLRQLEMMYPKAFFMNRSIAITRARDKLRSTQLLVKAGVSIPKTV
FSRNATDIDSLIEEIGGMPVIIKLARGTHGNGVVLAETKKAAKSVLQAFYLTNSDGTNVL
LQEFIRESAGVDIRAFVVGSQVVASMKRQSLDDDFRSNLHKGGEGASVKLTDAERKMCVK
AAKAMGLTVAGVDFMRSSRGALVLEVNASPGFGIEKITRRNVAGKIIEYIERNAKRGNKK
DKIGA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattgcaatcttatccaacggcaacattaattattcgacgcttcgcctgaaagaa
gaggctgaaaaacgcggtcatcaagttaaagttattaagtataaaaactgttacgtttca
attgacgaaaagcacccgacggtcatttacaagggtaaggagattggtgaatttgacgtg
gtgattccgcgaatcgcaagccatatgacaaagtacggaacagcggttttgcgtcaattg
gagatgatgtacccgaaggcgttttttatgaatcgctcgattgcaattactagggcgcgg
gataaattgcgctcaacacagttattagttaaagcgggagtgtcaattccgaagacggtc
ttttcccgaaacgcaactgacattgattcgctcattgaagagattggtggtatgccggtg
attattaagttggcgcgtggtacacacggaaatggcgtggttttggcggaaactaaaaag
gctgccaagtcggttcttcaggcgttctatttgaccaactcggacggcacgaacgtgcta
cttcaggagtttattagagagtcggctggtgtcgatattcgagcttttgtggttggtagt
caagtggtagctagtatgaagcggcagagtctggatgatgattttcgtagtaatttacac
aaaggtggcgaaggtgctagcgttaagttaacggacgccgagcgtaaaatgtgtgtgaaa
gctgctaaggcaatgggattgacagttgctggagtcgacttcatgagatcaagccgtggc
gctttggtgctggaagttaatgctagtccaggatttggaattgagaaaattactcgccga
aatgtggctggaaagataattgagtatattgagcgaaacgccaagcgtggtaataaaaaa
gataaaatcggcgcttag
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