Candidatus Nanosynbacter sp. HMT-352: LR957_03635
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Entry
LR957_03635 CDS
T09649
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
nanh
Candidatus Nanosynbacter sp. HMT-352
Pathway
nanh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nanh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LR957_03635 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nanh03019
]
LR957_03635 (orn)
03009 Ribosome biogenesis [BR:
nanh03009
]
LR957_03635 (orn)
Messenger RNA biogenesis [BR:
nanh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LR957_03635 (orn)
Ribosome biogenesis [BR:
nanh03009
]
Eukaryotic type
Pre-60S particles
RNases
LR957_03635 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UHA57380
LinkDB
All DBs
Position
676425..676976
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AA seq
183 aa
AA seq
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MKASFKPKKILWVDLEMTGLDPVRDEILEVAAIATDWNFKEIATYEGIVRHDSEKLAKLL
DRNAGFWNENPEARRGLEEQNESGKPLAEIEHELLAFCDEYFTGETKILLAGNSIHQDRR
FIDQWWPTLSKKLHYRVLDVSAWKVVFEGKYGKKFAKPEDHRALEDIRGSIMELEYYLKK
VKV
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaagttttaagccgaaaaagattttatgggtggatttggagatgactggattg
gatccagtgcgtgatgagattttggaagtggcggcaattgcgacggattggaattttaag
gaaattgcgacgtacgaaggaattgtgcgtcacgattcggaaaagctggctaagttgttg
gaccgaaatgctggtttttggaatgagaatccggaagcgcgacgcgggctggaggagcag
aatgaatcgggcaagcctttggcggaaatagagcacgaattgttggcgttttgtgatgag
tattttacgggtgaaacgaagattttgttagcaggtaattcaatccatcaggatagacga
tttattgatcaatggtggccgacgttgtcaaaaaaactacattatcgtgtgttggatgtg
agtgcttggaaggttgtgtttgaaggcaaatacggtaagaaattcgccaagccggaagat
catcgagcgctggaagacatccgcggcagtattatggaacttgaatattatttgaaaaag
gtaaaggtatga
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