Neisseria animaloris: NCTC12227_00021
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Entry
NCTC12227_00021 CDS
T06907
Name
(GenBank) DNA helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
nani
Neisseria animaloris
Brite
KEGG Orthology (KO) [BR:
nani00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nani03019
]
NCTC12227_00021
Enzymes [BR:
nani01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NCTC12227_00021
Messenger RNA biogenesis [BR:
nani03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NCTC12227_00021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
HA2_C
HA2_N
zf_C2H2_ZNF598
Motif
Other DBs
NCBI-ProteinID:
VEJ20320
UniProt:
A0A3S5F6D4
LinkDB
All DBs
Position
1:complement(24122..27025)
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AA seq
967 aa
AA seq
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MQNIKNNQSENTNRPSESEFLRSKNLSDGLKSLSPSKPRYRLTALGEQMARLPIDPKVAR
ILLAAQKHDCMAEILVIVSALSIQDPRERPLEAREAAQKAHERFTDKQSDFLAYLNIWDS
FQRERDKGLSNKQLVQWCRQYFLSHLRMREWRELHHQLADIAVEMGLTTKEQAFRRPPAQ
PQLPSATEGSPLRKNTGDQDLSAKLKQKQLDKKQHRAHIRAAKEAGYEQIHRALLTGLIA
NVGMKSPDGHDYTGARGSHFHLFPASALFKSKPKWVMAAELTETTRLYARDVAAIQPEWI
EQEAPHLVRYHYFEPHWEQKRGEVVASERVTLYGLTVLPRRPVAYGKVAPEEAREIFIRS
ALVAQECNLQTAFFIHNKKLIKEISDLEHKSRKQDVLVDEEALFEFYNRRLPQFYEPSEK
AENVGRIPESDNAAKTKADTMSDTSIRPTQNTLVSDGLSGSPHHTGRLKKPLPLADIRTF
QSWLKTAERDNPRLLFLTREDLMQHAAAHITEEQFPPHWKNADGKFKLSYRFEPHHPLDG
VTLTLPLTVLNRLLAPTLEWLVPGMLREKLQLLIKALPKQIRRICVPVPDFITKFLESNP
NRQEPIIPQLARFIAKTAGDVRLLEQIDQDEWSAFKLPDHCYFNLRIIDDGGQELATGRD
LAKLQQELGQAAAVTFRDNTQEFERDNLTNWNIGTLPESIKFARGKQQLTGYLGLQKEKN
GSIALRLFDTPEAAEQAHRQGVIALMQLQLKEHMKDLGKGIQGFTQAAMLLKHIPADTLR
DDLAAAICDRAFIGDDELPRSEKAFKEQIKRARSRLPAVKEAMSRYLQDTAAAYAELNGK
LGKHPLTHLLRERTQTLLSAGFAGRTPWSQWPRLPVYLKAMTLRMEKYSTNPARDAAREA
DIQELEQMWQDKVQSLLKQNQPVSDGLKMFKWQIEELRVSLFAQELKTPSPVSVKRLLKE
WDLLNKG
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacatcaaaaataatcaatcagaaaatacaaataggccgtctgaaagcgagttt
ctgcgaagcaaaaacctttcagacggcctgaaatccctttccccaagcaaaccccgctat
cgcttaaccgcgctcggcgaacaaatggcgcggctgcccatcgacccgaaggttgcccgc
attctgctggcggcgcaaaagcacgactgtatggcggaaatactcgttatcgtgtccgct
ctgtcgattcaagacccgcgcgaacgtccgcttgaagcccgtgaagccgcccaaaaagcg
cacgaacgctttaccgacaagcagtccgactttctcgcctacctcaatatttgggacagc
ttccagcgcgagcgcgacaaaggtttgtccaacaagcaactggtgcaatggtgccgccaa
tatttcctttcccacctgcggatgcgcgagtggcgcgaactgcaccaccagcttgccgac
attgcggtggaaatgggtttgaccaccaaagagcaggctttcagacggcctcctgcacaa
ccgcaattgccgtctgcgaccgaaggaagtcccttgcggaaaaacaccggcgaccaagat
ttatctgccaaactcaaacaaaaacaattggataaaaaacagcatcgcgcccatatccgc
gccgctaaagaagcgggctacgaacaaatccaccgcgccttgctcaccggtctcatcgcc
aacgtcggcatgaaatcgcccgacggccacgactacaccggcgcgcgtggctcgcacttt
catttgttccccgcctctgccctgttcaaatccaaacccaagtgggtaatggccgccgaa
ctcaccgaaaccacccgcctttatgcccgcgatgttgccgctatccagcctgaatggatc
gagcaggaagcgccgcacctcgtgcgctaccactatttcgagcctcattgggagcagaaa
cgcggcgaagtcgtcgccagcgaacgcgttaccctctacgggctgaccgtgctgccgcgc
cgccccgttgcctacggcaaagtcgcccccgaagaagcccgcgaaatctttatccgcagc
gcgttggtggcgcaggaatgcaatcttcagacggccttttttatccacaataaaaagctg
attaaagaaatcagcgatttggagcacaaatcgcgcaagcaggacgtgctggtggacgaa
gaggccttgtttgagttttacaaccggcgtttaccgcagttttacgagccgtctgaaaag
gcggaaaacgtaggtcggattcccgaatccgacaacgcggcaaaaacaaaggcagatacg
atgtcggataccagtatccgacctactcaaaataccctcgtttcagacggcctttcaggt
agcccgcatcacacaggccgtctgaaaaaaccattgccccttgccgacatccgcaccttc
caaagctggctcaaaaccgccgagcgcgacaacccgcgcctgctcttcctcacccgcgaa
gaccttatgcagcacgccgccgcgcacatcaccgaagagcagtttccgccccattggaaa
aacgccgacggcaaattcaaactcagctaccgcttcgagccgcaccacccgctcgacggc
gtaaccctcaccctgccgcttaccgtgctcaaccgcctcctcgcccccacgctcgaatgg
ctcgtgcccggcatgttgcgcgaaaaattgcaactgcttatcaaagccctgcccaaacaa
atccgccgcatctgcgtgcccgtgcccgacttcatcacaaaatttttagaaagcaacccc
aaccgccaagagccgatcattccccagcttgcccgctttatcgccaaaaccgccggcgac
gtgcgcctgctcgagcaaatcgaccaagacgaatggagcgcattcaaactgcccgatcac
tgctatttcaacctccgcatcattgacgacggcggccaagagcttgctaccggccgcgat
ttagccaaactccaacaagagctaggccaagccgccgccgtaaccttccgcgacaacacc
caagaatttgagcgcgacaacctcaccaactggaacatcggcaccctgcctgaaagcatc
aaattcgcccgcggcaaacaacagctcaccggctatctcggcctgcaaaaagaaaaaaac
ggcagcatcgccctgcgcctgttcgacacccccgaagccgccgaacaagcccaccgccaa
ggcgtgatcgccctcatgcagctccagctcaaagagcacatgaaagacttgggcaaaggc
atccaaggcttcacccaagccgccatgctgctcaaacacatccccgccgacaccctgcgc
gacgacctcgccgccgccatctgcgatcgcgcctttatcggcgacgacgagttaccccgc
agcgaaaaagccttcaaagaacaaatcaaacgcgcccgcagccgcctgcccgccgtcaaa
gaagccatgagccgctacctgcaagacaccgccgccgcctacgccgaactcaatggcaaa
ctcggcaaacacccgctcacccatctgctgcgcgaacgcacccaaaccctgctgtccgcc
ggattcgccggccgcaccccgtggagccaatggccgcgcctacccgtctacctcaaagcc
atgaccctgcgcatggaaaaatacagcaccaaccccgcccgcgatgccgcacgcgaagcc
gatattcaagagttggaacagatgtggcaagacaaggtacaatcacttttgaaacaaaac
caacccgtttcagacggcctgaagatgtttaaatggcaaatagaagaactgcgcgtgtcg
ctgtttgcgcaggagttgaagacaccgagtccggtgtcggtgaagaggttgttgaaggag
tgggatttgttgaataaagggtaa
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