Neisseria animaloris: NCTC12227_00577
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Entry
NCTC12227_00577 CDS
T06907
Symbol
recD
Name
(GenBank) recombinase D
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
nani
Neisseria animaloris
Pathway
nani03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nani00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC12227_00577 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nani03400
]
NCTC12227_00577 (recD)
Enzymes [BR:
nani01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NCTC12227_00577 (recD)
DNA repair and recombination proteins [BR:
nani03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC12227_00577 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
AAA_11
UvrD_C_2
Viral_helicase1
Helicase_RecD
SH3_13
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_16
AAA
T2SSE
nSTAND3
DEAD
AAA_28
SRP54
AAA_5
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
VEJ20857
UniProt:
A0A448UAG1
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All DBs
Position
1:649278..651047
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AA seq
589 aa
AA seq
DB search
MTTALPSDSDQAAAEAAVAFLERHAPADAAVAAPYIPRLFAALQDGHSFIWLDNREAAEL
AAASNVVGKGEGMPLVLEGKRLFLGRMWQLERDLAAEIVRLAVAEVEAVDWLQAGRNLAE
WFGEKGSEGQRDAAALALLQPFMLISGGPGTGKTTTVAKLLGLLCGSNTQLPRIALAAPT
GKAAAHMARALHKALNRFELPEKAKRHLLQLEGQTVHRLLKLRPPQMQPLFNGEQPLPLD
ILVVDEASMLDVSLLLHLLRAVPQGCRVILLGDENQLPSVGAGAVLAELAQETVLDSDTA
QELAAMLPQHGFTVADHPPPLSQNVGRLKTSHRFGENSGIGCLARAVVEGDAETAWAQFA
CFPDELEVRTGRSRQQAEWLYGKHADYWQAVDAGDVKKAFEHQTDAVVLAAWRDDAAAFN
EEYRRCLQRYGRAGADVPWFAGQAVMITRNDYALDLFNGDVGLVMPDDTAPDMLAAYFPS
VEGYRKIALSRLPEHETAFALTVHKSQGSEYREVWLLPPSVENRGSAEGFSRALLYTAVT
RARGRFVFWGTQDGFQTACRESCNRRSALREMIAERFADYAENGERAGR
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgactactgctttgccatccgattcagaccaagccgccgccgaagctgccgttgctttt
ctcgaacgccatgctcccgccgatgccgccgttgccgctccttatattccgcgcctgttt
gccgccttgcaggacggacattcctttatttggttggacaaccgcgaagcggcggagttg
gcggcggcctcaaatgtggttggcaagggagagggcatgccgctggtgttggaaggaaaa
cggctttttctcggcagaatgtggcagctcgaacgcgatttggcggcggaaatcgtgcgg
ttggcggtagcggaagttgaagcggtagactggttgcaggcagggcggaacttggcggaa
tggttcggtgaaaaaggcagcgaaggccaacgcgatgcagcggctttggcgttattacag
ccgtttatgctgatcagtggtggccccggcacgggtaaaaccactacggtggccaagctg
cttggccttttgtgcggtagcaatacgcaactgccccgaatcgcactggcggcacccacg
ggtaaagctgccgcgcacatggcacgggcgttgcataaagcgttaaaccgatttgaactg
ccagaaaaagctaagcggcatttgctgcaactcgaaggccaaaccgttcaccgcctgctc
aagttaaggccgccgcagatgcagccgctgtttaatggtgaacaaccgttaccgctggat
attctggtggtagatgaagcctcgatgttggatgtgtcgctgctattgcatttgctgcgt
gccgtgcctcaggggtgccgtgtgattttgctgggcgatgaaaaccagttaccttcggtg
ggtgcgggtgcggtgctggcggaattggcacaagaaacggtgctggattcggatacggcg
caagagcttgccgccatgttgccgcagcacggatttaccgttgccgatcatccgccgccg
ttatcgcagaacgtaggccgtctgaaaactagccaccgttttggtgaaaacagcggtatc
ggctgtttggcgcgggcggtagtggagggtgatgctgaaaccgcatgggcgcagtttgcc
tgtttccctgacgagttggaagtacgcacgggcagaagcaggcagcaggcggagtggctg
tacggcaagcacgccgattattggcaggctgtcgacgcgggcgatgtgaaaaaggcgttt
gaacatcaaaccgacgcagtagtgttggcggcatggcgcgatgatgcggcggcctttaac
gaggaataccgccgctgcctgcaacgctacgggcgtgccggtgccgatgtgccgtggttt
gcggggcaggcggtgatgattacgcgtaatgattacgcactggacttgtttaatggcgat
gtcggtttggtaatgcctgatgataccgctcctgacatgttggcagcttattttccaagt
gtggaaggctaccgcaaaatcgccctcagccgtctgcctgaacacgaaaccgcatttgcg
cttaccgtgcataaaagccaaggttcggagtatcgcgaagtgtggctgctgccgccttcg
gtagaaaatcgcggcagtgcggaaggtttttccagagccttgctttataccgccgttacc
cgtgcccgcgggcggtttgtgttttggggcactcaggacggttttcagacggcctgccgg
gaaagctgcaacaggcggagtgctttgcgtgaaatgatagccgaacgctttgcagattat
gcggaaaacggcgagagagccggacggtaa
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