Neisseria animaloris: NCTC12227_01632
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Entry
NCTC12227_01632 CDS
T06907
Symbol
recJ
Name
(GenBank) RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
nani
Neisseria animaloris
Pathway
nani03410
Base excision repair
nani03430
Mismatch repair
nani03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nani00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC12227_01632 (recJ)
03430 Mismatch repair
NCTC12227_01632 (recJ)
03440 Homologous recombination
NCTC12227_01632 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nani03400
]
NCTC12227_01632 (recJ)
DNA repair and recombination proteins [BR:
nani03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NCTC12227_01632 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NCTC12227_01632 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NCTC12227_01632 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
VEJ21866
UniProt:
A0A448UD82
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All DBs
Position
1:1737204..1738919
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AA seq
571 aa
AA seq
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MSVKIRTRTINQSVCQTLIQAGTDPLLARLCAARDVASPAELDDKLAALLPYQSLSRCTE
AASRLADAVERKQKILIVADYDADGATACAVGIKGLSAMGASVDFLVPNRFEHGYGLTPE
LADIAAAQGVQLLLTVDNGIASIAGVERAQALGLDVIVTDHHLPAETVPDCIIVNPNQRG
CNFASKSLAGVGVIFYVLMALRAELRQRGRFRPSEHSLSDGLNEPNLAELLDLVALGTVA
DVVPLDHNNRILVSQGLKRMRAGKMRPGIRALFEIARRDWRKAQPFDMGFALGPRINAAG
RLDDMSVGIACLLADNEAEAQSLAAQLNDLNIERREIEQSMLQDALNAFPESLPAGQTTL
VVYQNDFHQGVVGIVASRLKDRFYRPAIVFAPADNGEVRGSGRSIPGLHLRDALDLVSKR
HPDMILKFGGHAMAAGLSIREENIAAFQTAFEQTVRELVHADDLAQTYITDGSLPAADIT
LTQAQNLARQVWGQGFAPPTFTDEFAVIRQQAMGVNHKKVWLRKEGCEFEAMFWRCTEEL
PTRVRTVYRPVANEWRNNIELQLYIDYWEAA
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcaaaatccgtacccgcaccattaatcaaagcgtttgccaaaccctgattcag
gccggcaccgacccgctgctcgcccgcctgtgcgccgcccgcgatgtggcctcccctgcc
gagttggacgacaaactcgccgccctgctgccctaccaaagcctctcccgatgcaccgaa
gccgcttccagattggccgatgcggtggagcgcaaacagaaaatcttaatcgtggccgac
tacgatgccgacggcgcaaccgcctgtgcagtcggcatcaaagggttgtcggcaatggga
gcctcggtcgattttttagtgcccaaccgcttcgagcacggctacggcctcacgcccgaa
ctggccgacatcgccgccgcccaaggcgtgcagttattgttaaccgtcgataacggcatc
gccagcattgccggcgtagaacgcgcgcaggcattgggtttagatgttatcgtaactgac
caccatctgcctgccgaaaccgtgcccgactgcatcatcgtcaaccccaaccaacgcggc
tgtaactttgccagcaaaagtttggcgggcgtgggcgtgattttttatgtgctgatggct
ttgcgtgccgaattgcggcagcgcggccggttcaggccgtctgaacattcgctttcagac
ggcctcaacgaaccgaatctggccgaactgttggatttagtcgcactcggcaccgttgcc
gatgtcgtgccgctcgaccacaacaaccgcattctcgtttcacaaggcttgaaacggatg
cgtgcggggaaaatgcgccccggtatccgcgccctgtttgaaatcgcaaggcgcgactgg
cgcaaagcccagcctttcgacatgggctttgcactcggcccgcgcatcaatgccgccggc
cggcttgacgatatgtcggtcggcatcgcctgcctgctggccgacaacgaagccgaagcg
caaagccttgccgcccaactcaacgatttgaacatcgaacggcgcgaaatcgaacaatcc
atgctgcaagacgcgctgaatgcttttcccgaatcattgcccgccggccaaaccactttg
gttgtttaccaaaacgactttcatcaaggtgtggtcggcatcgtagccagccgtctgaaa
gaccgtttctaccgccccgccatcgtgttcgcccctgccgacaacggcgaagtgcgcggt
tccggccgctccattcccggcctgcatttgcgcgatgcgttggatttggtgagcaaacgc
caccccgacatgattttgaaattcggcggacacgccatggcagcaggcttgagcatacgc
gaagaaaacattgccgcttttcagacggcctttgagcagaccgtacgcgaattggtgcat
gccgacgacttggcgcaaacctacatcaccgacggcagcctgcccgccgccgacatcacg
ctcacacaagcgcaaaacctcgcccgccaagtgtgggggcaaggcttcgccccgccgacg
tttaccgacgaatttgccgttatccgccaacaggctatgggcgtaaaccacaaaaaagtg
tggctgcgtaaagaaggctgcgaatttgaagccatgttttggcgctgcaccgaagagctt
cccacccgcgtccgcacggtataccgccccgtggccaacgaatggcgcaacaatatcgaa
ttgcaactttatatcgactattgggaagctgcatga
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